Gene Information

Name : N559_5259 (N559_5259)
Accession : YP_008415040.1
Strain :
Genome accession: NC_022078
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 166666 - 167169 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGACCGCAGTCGGT
AACCTCACGCATACAACCGGGCAGTGACGTCATTGTTTGCGCGGAAATGGACGAACAGTGGGGTTACGTCGGTGCTAAAT
CACGCCAGCGCTGGTTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTATTCGGTGAACGCACGTTG
TCCACGCTGGAGCGTCTTCTGGGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTTTATGA
ATCACGCCTGAAGGGAGAACTGCACGTTATCAGCAAGCGATATACGCAGCGCATTGAGCGGCATAACCTGAATCTGAGGC
AGCATCTGGCAAGGCTGGGCAGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence : 
MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
STLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 4e-48 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 5e-66 96
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 5e-64 95
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 5e-64 95
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-63 94
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-63 94
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-48 94
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 8e-66 92
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 5e-63 92
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 8e-66 92
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 8e-66 92
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-63 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N559_5259 YP_008415040.1 IS1 transposase VFG0612 Protein 1e-63 92