Gene Information

Name : yhdH (RBAU_0936)
Accession : YP_008411932.1
Strain : Bacillus amyloliquefaciens UCMB-5033
Genome accession: NC_022075
Putative virulence/resistance : Unknown
Product : putative sodium-dependent transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 981811 - 983166 bp
Length : 1356 bp
Strand : +
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId:15849754, 16850406; Product type pt:putative transporter

DNA sequence :
GTGTCTGACCAAAAAAGGGTTCAATGGGCCTCAAAAATAGGATTTATTATGGCCGCTGCCGGTTCGGCGATCGGCCTGGG
AGCCATTTGGAAGTTCCCTTACGTAGCGGGTACGAACGGGGGAGGCGCTTTTTTTCTTGTATTCGTCCTCTTTACCGTGC
TTTTAGGCTATCCGCTTTTGCTCGGTGAATTTATTTTCGGAAGACGGAGCCAGACAAATGCGATTGATGCCTACAAACAA
GCCGCGCCGAAGTCGGTATGGCACCTTACGGGTTATGTGGGTGTGGCGGCCTGTTTTTTAGTTTTGTCTTTTTACAGTGT
TGTCGGCGGGTGGATTTTGCTTTATGTGTTAAAAGCCGTTACCGGTTCTTTATCCGGGCTCACTCAGGAGCAGTACGGCA
CGGTGTTCGGGACGGTCATTGAAAATCCGATCCAGACTCTCATTGCGCAGCTTGTATTTATGATCATGACGGTGGCGGTC
GTCGCAAAAGGCGTGCAGAAAGGGATTGAACGTGTCAGTGCGGTGCTGATGCCGATTTTATTCGTGCTGTTTCTATTGCT
TGTGCTGCGATCAGTCACGCTCGATCATGCCGTTGAGGGGATTAGATTTTTATTGGTTCCGCACTTTGAAGATTTGACGC
CGGAATCCATCCTATATGCTTTAGGACAGGCGTTTTTTACATTAACGCTCGGTGTTTCGGTCATGGTGACATACAGTTCA
TATCTTCCGAAAACCCAAAATCTTCCGGGTTCGGCGGGTTCCATTGTTATGATGAATGTGCTCGTTACGCTGTTTGCGGG
ACTGGCCATTTTCCCGGCGGTTTTTTCGTTCGGCTTTAAACCGGATGAAGGGCCTACACTGCTGTTTACCGTGCTGCCGG
CTGTGTTTGACCGGCTGCCGTTCGGCTCGCTGTTTTTTATCAGCTTTTTGGCGGTCTTTTTCTTCGCCGCGCTGACTTCG
GCCTTTTCGATGGTGGAAATTATCGTGGCGACTGTGGGGAAAGGTGATGAAACGAAAAGAAAGAAGCTGTCGTGGACAAG
CGGTCTGCTCATTTTCTTAGTCGGAATTCCGTCTTGTTTATCATACGGTGTTCTCGGTGATGTTCATTTGTTCGGAAAAA
CGTTTTTTGATCTTGCGGATTTCACCGTCAGCAATGTGCTGATTCCGCTCGGCGCTTTATTAATATCAATCTTCGTCCCG
CTGAAAATACCGAAGCAGGAGCTGTTTGCCGAGATGAAAAGCGGTTCCGCCATCGGCTATCGTTTCTTTCAGGTGTGGTA
TTTCCTTCTGAAATATCTCGTGCCGCTGGCTATCATCGTCGTATTGCTGCATTTAGTCGGCGTTCTTTCATTTTAA

Protein sequence :
MSDQKRVQWASKIGFIMAAAGSAIGLGAIWKFPYVAGTNGGGAFFLVFVLFTVLLGYPLLLGEFIFGRRSQTNAIDAYKQ
AAPKSVWHLTGYVGVAACFLVLSFYSVVGGWILLYVLKAVTGSLSGLTQEQYGTVFGTVIENPIQTLIAQLVFMIMTVAV
VAKGVQKGIERVSAVLMPILFVLFLLLVLRSVTLDHAVEGIRFLLVPHFEDLTPESILYALGQAFFTLTLGVSVMVTYSS
YLPKTQNLPGSAGSIVMMNVLVTLFAGLAIFPAVFSFGFKPDEGPTLLFTVLPAVFDRLPFGSLFFISFLAVFFFAALTS
AFSMVEIIVATVGKGDETKRKKLSWTSGLLIFLVGIPSCLSYGVLGDVHLFGKTFFDLADFTVSNVLIPLGALLISIFVP
LKIPKQELFAEMKSGSAIGYRFFQVWYFLLKYLVPLAIIVVLLHLVGVLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0458 YP_039907.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 1e-62 46
SAS0416 YP_042543.1 sodium:neurotransmitter symporter family protein Not tested vSa¥á Protein 1e-62 46