Gene Information

Name : ygzD (RBAU_0879)
Accession : YP_008411875.1
Strain : Bacillus amyloliquefaciens UCMB-5033
Genome accession: NC_022075
Putative virulence/resistance : Virulence
Product : putative HTH-type transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 925438 - 925644 bp
Length : 207 bp
Strand : -
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr:putative regulator

DNA sequence :
ATGATGAAAAATAAAGTAAAAGAGCTGAGAGCCAGATTCGGCTATTCTCAGGAAACGCTCGGAAAAGAAGCCGGAGCCAC
CAGACAGACGATTGCAGCGATTGAAAAAGGAGATTATGTGCCTTCACTTTTATTGGCGCTTAACATCTGCCGGGCTTTCT
CCCTGCCGATGGAGGAAGTGTTCTGGCTGGAGGAGGAGAAAAAATGA

Protein sequence :
MMKNKVKELRARFGYSQETLGKEAGATRQTIAAIEKGDYVPSLLLALNICRAFSLPMEEVFWLEEEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 7e-07 44
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-04 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ygzD YP_008411875.1 putative HTH-type transcriptional regulator VFG2168 Protein 3e-05 42
ygzD YP_008411875.1 putative HTH-type transcriptional regulator VFG2175 Protein 3e-05 42