Gene Information

Name : ydeM (RBAU_0497)
Accession : YP_008411503.1
Strain : Bacillus amyloliquefaciens UCMB-5033
Genome accession: NC_022075
Putative virulence/resistance : Unknown
Product : putative dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 541976 - 542401 bp
Length : 426 bp
Strand : +
Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe:putative enzyme

DNA sequence :
ATGAAGTTGGATGAATTCACCGTCGGGCAGGTTTTTCAAACTAAATCTTTTGAATTAACAAAAGAGAATATAATGAATTT
TGCAGAAGTGTATGACCCACAATACATGCATTTAAATGAAGAAAAAGCAAAAATGGGCAGGTTTAATGGAATTATTGCTT
CTGGAATACAAACGTTATCTATTACTTTTAAGCTTTGGATTGAAGAAGGGTGTCATGAAGACGATATTATTGCTGGGACA
GGAATGAATAATATAAAATTCCTAGCACCTGTTTACCCTAATGATAAACTGAACACTATTGTTAAGGTTATTGATAAAAA
ACCAAATAAAAGCCAGACGGGGATACTTACTGTATTGTTATCTACCTATAATCAGAAAGAGGAAAAAGTGTTTGAAGGTG
AGTTATCAGTATTAATTAAACGCTAA

Protein sequence :
MKLDEFTVGQVFQTKSFELTKENIMNFAEVYDPQYMHLNEEKAKMGRFNGIIASGIQTLSITFKLWIEEGCHEDDIIAGT
GMNNIKFLAPVYPNDKLNTIVKVIDKKPNKSQTGILTVLLSTYNQKEEKVFEGELSVLIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAA94333.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-37 55
unnamed ACL99837.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-37 54
SH0090 YP_252005.1 hypothetical protein Not tested SCCmec Protein 1e-37 54
SAR0038 YP_039514.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-37 54
unnamed BAG06198.1 MaoC domain protein dehydratase Not tested Type-VII SCCmec Protein 1e-37 54
SAMSHR1132_00310 YP_005324555.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-37 54
unnamed BAB47625.1 hypothetical protein Not tested Type-III SCCmec Protein 1e-37 54
MW0030 NP_644845.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-37 54
unnamed BAC57477.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-37 54
SAV0040 NP_370564.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-37 54
unnamed BAB72114.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-37 54
SA0037 NP_373277.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-37 54
unnamed BAB72133.1 hypothetical protein Not tested Type-IVb SCCmec Protein 1e-37 54
SAPIG0041 YP_005732851.1 MaoC like domain, putative Not tested Type-V SCCmec Protein 1e-37 54
unnamed BAA82222.2 - Not tested Type-II SCCmec Protein 1e-37 54
SAUSA300_0031 YP_492751.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-37 54
unnamed BAD24825.1 conserved hypothetical protein Not tested Type-V SCCmec Protein 1e-37 54
SERP2522 YP_190063.1 acyl dehydratase MaoC Not tested Type-II SCCmec Protein 1e-37 54
maoC YP_184943.1 MaoC domain-containing protein Not tested Type-I SCCmec Protein 1e-37 54