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Name : ycdG (RBAU_0282) Accession : YP_008411294.1 Strain : Bacillus amyloliquefaciens UCMB-5033 Genome accession: NC_022075 Putative virulence/resistance : Unknown Product : putative oligo-carbohydrate hydrolase Function : - COG functional category : - COG ID : - EC number : 3.2.1.- Position : 311921 - 313597 bp Length : 1677 bp Strand : + Note : Evidence 3:Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId:11544224; Product type pe:putative enzyme DNA sequence : ATGAATGACTGGTGGAAAGACGCCGTTGTCTATCAAATCTATCCGCGAAGCTTTCAAGATACGAACGGCGACGGCATTGG CGACCTGCGGGGGATTATCGCGCGTCTCGATTATATAAAAGAACTTGGCGCTGATGTGATATGGATCTGCCCGATTTACC CGTCGCCAAACGTCGATAACGGCTACGATGTGACGGATCATCAAGCGATTATGGAATCTTACGGAAGGATGGAGGACTTT CACGATCTGCTTACAGAATGCCGCAGCCGCGGATTAAAGCTTGTGATGGATTTCGTCTTAAATCATACCTCCACGGAGCA TCCTTGGTTCAAAGAGGCGGAAATGAATCCGGACAGCAAATACCGCGATTATTATATTTGGCGGCCGGGCACCGCGGCCG GCCCGCCGACCGATTGGGTGTCGGATTACGGACAATCCGTCTGGCAGTACGAAGAACATACGGGCGAATATTACCTGCAT ATGAACGCCGTCAAACAAGCCGATCTGAATTGGGAAAATCCCGAGGTTCGGCAATCAGTATACGAGATGATGAGATTTTG GCTCGATAAAGGCGTGGACGGATTGCGTATAGACCAGCTCCATCTTCTGTCAAAAAAAGAATATTTGCCGCCATATGAAG ATTACATCGCCCGCCGGGCCGATCCGAAGCCTTTTCGGCCAAACGGGGCACGGATACATGATTACTTAAAAGAAATGACG AAAGAGGTATTTTCCAAATATAACGTGATGTCGGTCGGCGAGGCCGGATCAGTGACGCCTGAAGAAGGGCTGGTCTACAC GGGAACCGATGAGCATGAACTGAATATGATTTTTCATTTTCAGCATATGGAGCTTGATCAAAAGCCGGGCCAAGAGCATT GGGATGTAAAACCGCTTGAGCTGTCCGATTTGAAGAAAGTGCTCACAGATTGGCAGGAAAAACTGGAACATCGAGGCTGG AATACGCTGTATTGGTGCAATCATGACCAGCCCCGGATCGTATCCCGTTTCGGAGACGAAGGCACATACCGCAAAGCATC CGCCAAAATGCTTGCCGCCCTGCTTTATTTCATGAAAGGCACGCCGTACATTTACCAGGGGGAAGAAATCGGCATGACAA ACGCTCCGTTTGACAGAATAGAGGATTATCAAGATATTCAGACCATCAATATGTATCATAAAAGGGTATTTGAAATGGGC CGGAACAGGGAAGAAGTCATGGCGTCCATTATGGCGAAAAGCCGGGACCATGCCCGTACACCGATGCAGTGGGACGGCAG CAAGAATGCCGGATTTACGGAGGGCGAACCGTGGCTCGCGGTCAATTCCAATTACAAAACCGTCAATGCGGCCGAGGCTC AGGATGATCCCGATTCTATATTGAACTTTTACAAAAAACTGATCCGCCTGCGAAAACAGTATGCTGATATCATAAAAGGC AGCTACACGCTGCTGCTTCCTGATGACCCGCAGCTGTTCGTGTATGAAAGACAGGCAAACGGACAAAAACTCATGTCCAT CAGCAACGTATCGAAAGAAGAAGCCGCTTTTTATTGGCCGGACGGTTCCGAACCTGAAAGGGCCGAGCTGCTTCTCAGCA ACTATGATAATGACAGCGGCACGGAATCCCGCATCACATTCCGCCCATACGAAACAAGAGTTTATCTGCTTGCCTGA Protein sequence : MNDWWKDAVVYQIYPRSFQDTNGDGIGDLRGIIARLDYIKELGADVIWICPIYPSPNVDNGYDVTDHQAIMESYGRMEDF HDLLTECRSRGLKLVMDFVLNHTSTEHPWFKEAEMNPDSKYRDYYIWRPGTAAGPPTDWVSDYGQSVWQYEEHTGEYYLH MNAVKQADLNWENPEVRQSVYEMMRFWLDKGVDGLRIDQLHLLSKKEYLPPYEDYIARRADPKPFRPNGARIHDYLKEMT KEVFSKYNVMSVGEAGSVTPEEGLVYTGTDEHELNMIFHFQHMELDQKPGQEHWDVKPLELSDLKKVLTDWQEKLEHRGW NTLYWCNHDQPRIVSRFGDEGTYRKASAKMLAALLYFMKGTPYIYQGEEIGMTNAPFDRIEDYQDIQTINMYHKRVFEMG RNREEVMASIMAKSRDHARTPMQWDGSKNAGFTEGEPWLAVNSNYKTVNAAEAQDDPDSILNFYKKLIRLRKQYADIIKG SYTLLLPDDPQLFVYERQANGQKLMSISNVSKEEAAFYWPDGSEPERAELLLSNYDNDSGTESRITFRPYETRVYLLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-139 | 50 |
