Gene Information

Name : ytrE (RBAU_2874)
Accession : YP_008413852.1
Strain : Bacillus amyloliquefaciens UCMB-5033
Genome accession: NC_022075
Putative virulence/resistance : Resistance
Product : ABC transporter (ATP-binding protein)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3018131 - 3018835 bp
Length : 705 bp
Strand : -
Note : Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; PubMedId:10986249; Product type t:transporter

DNA sequence :
GTGGTGTACGTGATAGAAGTACAGCATATTGATCATTCATTTAAAATCGGCAGGAAAGGCAGAGAGAGTGAGGTTCCGGT
ATTGAAGGATGTCTCTTTGACCGTTGAAAAAGGGGAAATTGCCTGTATCGTCGGTCGGAGCGGTTCCGGAAAATCAACGC
TTCTGAATTTAATATCCGGATACATAGCGCCGACGAAGGGCCGTATCGTCATTAACGGCACTGATGTGACGGGCTTCAGT
GAAAAAGAGTGGGCGCAGTTCCGCCTCGGGCATTTCGGCTTTATTTTTCAAAGTTTTCAGCTCATTCCGAGTCTGACAAC
CTATGAAAATGTTGAAATGCCGCTTGCCTTAAAAGGCGTCAAACCGTCTGAACGCAAGCAGAAAGTCGCGGACATGCTGA
AACGGGTCGGACTTGAGAATCATGCGAATCATTATCCGAATGAGCTGTCAGGCGGCCAGCAGCAGCGTGTCAGTATCGCA
AGAGCCCTCATTTTAAATCCGTCAATTATTTTAGCTGATGAGCCGACGGGAAGCCTTGATTCAGAAACGGAACTTGAGGT
GCTTGCATTAATTCAGCAGCTGAACCGGGAGCGCGGGATTACATTTGTCATCATTACGCATGACGATGAAGTCGCTTCGA
TCGCGCATTCAAAATTCCAGCTGCATGACGGTGTATTAAAAGGGGGCGTTACTGTTGAGATTTAA

Protein sequence :
MVYVIEVQHIDHSFKIGRKGRESEVPVLKDVSLTVEKGEIACIVGRSGSGKSTLLNLISGYIAPTKGRIVINGTDVTGFS
EKEWAQFRLGHFGFIFQSFQLIPSLTTYENVEMPLALKGVKPSERKQKVADMLKRVGLENHANHYPNELSGGQQQRVSIA
RALILNPSIILADEPTGSLDSETELEVLALIQQLNRERGITFVIITHDDEVASIAHSKFQLHDGVLKGGVTVEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_008413852.1 ABC transporter (ATP-binding protein) NC_008702.1.4606598. Protein 5e-42 48
ytrE YP_008413852.1 ABC transporter (ATP-binding protein) CP001581.1.gene598.p Protein 3e-38 45
ytrE YP_008413852.1 ABC transporter (ATP-binding protein) NC_012469.1.7686878. Protein 6e-41 44
ytrE YP_008413852.1 ABC transporter (ATP-binding protein) CP001581.1.gene798.p Protein 2e-36 43
ytrE YP_008413852.1 ABC transporter (ATP-binding protein) NC_012469.1.7686946. Protein 4e-23 42