|
Name : pdhD (RBAU_1427) Accession : YP_008412422.1 Strain : Bacillus amyloliquefaciens UCMB-5033 Genome accession: NC_022075 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes Function : - COG functional category : - COG ID : - EC number : 1.8.1.4 Position : 1491079 - 1492491 bp Length : 1413 bp Strand : + Note : Evidence 2a:Function of homologous gene experimentally demonstrated in an other organism; PubMedId:12682299, 1784816, 6815422, 9352926, 9588797; Product type e:enzyme DNA sequence : ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTGATTGGTGCGGGACCCGGCGGCTATGTAGCTGCCATCCG CGCTGCTCAGCTTGGACAAAAAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTCGGCTGTATTC CTTCAAAAGCGCTCATCAATGCAGGCCATCGTTACGAGAATGCAAAACATTCAGATGACATGGGGATCACTGCTGAGAAC GTAACGGTTGACTTTACAAAAGTCCAAGAATGGAAAGCTTCTGTTGTAAATAAGCTTACCGGCGGTGTTGCAGGTCTTTT AAAAGGAAATAAAGTGGACGTTATAAAAGGGGAAGCTTATTTCGTAGACAGCAACTCTGTCCGCGTAATGGATGAGAACT CTGCGCAAACATACACATTTAAAAACGCAATCATTGCTACCGGTTCTCGCCCTATCGAATTGCCAAACTTCAAATATAGC GAACGCGTTCTGAACTCTACAGGCGCACTTGCGCTTAAAGAAATTCCGAAAAAGCTCGTTGTTATCGGCGGCGGATATAT CGGTACTGAGCTTGGAACAGCGTATGCGAACTTCGGAACTGAATTGGTTATTTTAGAAGGCGGAGATGAAATTCTTCCTG GCTTCGAAAAACAAATGAGTTCTCTCGTTACCCGCAGACTGAAGAAAAAAGGCAACGTTGAAATCCATACAAGCGCCATG GCTAAAGGCGTTGAGGAAAGACCTGACGGCGTAACAGTTACATTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA TTACGTATTAATCACTGTCGGACGCCGTCCGAACACTGATGAGCTCGGCCTTGAGCAAGTCGGTATCGAAATGACTGACC GCGGTGTCATTAAAACAGACAAGCAGTGCCGCACAAACGTACCGAACATTTACGCAATCGGTGACATCATTGACGGACCT CCATTGGCTCACAAAGCGTCTTACGAAGGTAAAATCGCTGCCGAAGCTATTTCAGGAGAGCCGGCTGAAATCGATTACCT CGGTATTCCGGCGGTTGTATTCTCTGAGCCTGAACTGGCTTCTGTCGGTTACACTGAAGCACAGGCGAAAGAAGAAGGCA TTGAAGTCGTTGCAGCTAAGTTCCCGTTTGCAGCAAACGGACGTGCGCTGTCTCTTAACGAAACTGACGGCTTCATGAAG CTGATCACTCGTAAAGAAGACGGTCTTGTAATCGGTGCGCAAATTGCCGGCGCAAGCGCTTCTGACATGATTTCTGAATT GAGCCTGGCGATCGAAGGCGGAATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCGACATTGGGCGAAATCA CTATGGAAGCTGCCGAAGTAGCAATCGGAAGCCCGATCCATATCGTAAAATAA Protein sequence : MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKHSDDMGITAEN VTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYS ERVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVPNIYAIGDIIDGP PLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMK LITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-114 | 51 |
