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Name : JCM7686_pAMI8p086 (JCM7686_pAMI8p086) Accession : YP_008408470.1 Strain : Genome accession: NC_022050 Putative virulence/resistance : Unknown Product : pre-mRNA-splicing ATP-dependent RNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 81162 - 83720 bp Length : 2559 bp Strand : - Note : - DNA sequence : ATGACCTCCCCCTCCAACTCTCACCCCGGCAGCGCGGCAGCCGCCGGAGGCATGCTTACAGCAGAGCCGTTTGGCCGTTA TGGTCGGAGGGAGGGGACAACTAGGCGGAAATCACAGGTGGTGGATCGAAGCGGCACAGCAACAGAATTGGCGAGGGTTC GGGCACGGCTGGCCGAGCTGGATGCGGAACAACGTCGACTTTTGCAGGAGCTTTCGGCGCTGGAGGCCCGGGAAACCGCA GAAATAGCTGCACAGGCCAAACGTCCTGCATTTGAAAATGCCCCCGTCACGAACGCATCGTCATCGGGCGAGAAGGTAGA GCTGTTCCGCAGCCTGTTTGCTGGCCGCCCGGACGTGTTTCCAGTGCGATGGGAAAACCAAAAGACGGGACGTGCCGGCT ATTCGCCCGCCTGCTTCAATGAATGGGTGAGAGGCATCTGCGGAAAGCCAACTGTCAAATGCGGGGACTGCAAGCATCAG CGGTTCATTCCTCCCGATGCCAGTGTCATTGAACGACACCTCCGCGGCGGCGAGGGCCCTTCGGCCGACTTCGTGGCCGG CGTCTATCCGTTGTTGCGAGACGACACCTGCTGGTTCCTGGCGGCGGATTTTGACAAGGATTCATGGGCGGAAGATGCGG GCGCATTGCTCGAAACCTGCAGAGCAAAAGGAGTGCCTGCGGCGCTTGAACGATCCCGATCGGGCAACGGTGGCCATGTC TGGATCTTCTTCGGGGAACCGGTATCGGCTCGGATTGCCCGTCAGCTTGGATCGGCGCTGATCACGGAGACCATGGAGAG GCGACCGGAGATCGGCTTTGCATCCTATGACCGCCTCTTCCCGAACCAGGACACAATGCCTGTCGGCGGCTTTGGAAACC TGATCGCTTTGCCGCTGCAGCACAGCGCGCGGAAGGTCGGCAATAGCGTCTTCCTTAATCAAGACCTTCAGCCATTCGAA GACCAGTGGGCGTATCTGTCGACGCTGCCACGGATGTCCGCGGAGGCGGTGGCCAATCTTGTTGCGGCTGCTGAGGCATC TGGTCAGGTGCTGGCCGTTCGGATGCCGGTTGATGATGAAAACGCTGACGAGCCGTGGAAAATGTCGCCGTCGCGACGCC CGAAGACAAAGCCTGCGGACGTGGTGGTTCCGCCCAACATCAAGGTGACAGTCGCAGATCAGGTCTATATTGACCGAACC GGGCTGCCCTCTGCGATGATTGCCCAATTGGTACGGGTCGCAGCTTTCCAGAACCCCGAGTTCTATCGGGCTCAAGCGAT GCGACTGCCCACCTTCGGAAAACCTCGCGTGGTCTCCTGTGCCGAGCTGCACCCACGCCACATTGCCTTGCCTCGTGGCT GCTTCGATGAGGCAGTTGAAGTCCTGACCGAACACGGTGCGAAGGCAGAACTGGACGACCAGCGCAGCGATGGAACCCCG CTGCCGAACACGGTTCGGTTCCTTGGTGAGCTTCGGCCGCCGCAACAACGCGCCTTCGAGTCCCTCACCGCGCATGATAC CGGCGTGCTTGCCGCGACCACAGCCTTCGGCAAAACCGTCGTCGCGTCGGCCCTTATTGGTCATCGCGCCCGAAACACGC TGGTTTTGGTGCATCGTCGTGAACTTCTCGACCAGTGGGTTGAGCGGCTGAAGACTTTCCTTCAGATCGACCCCAAGCAG ATCGGTACAATTGGCGGTGGAAGGCGGAAACCGACAGGCATGATCGATGTGGCGCTTATCCAGAGCCTAGTGAGAAGCGG CGAGGTCGACGATATCGTGGCTGACTACGGCCAGTTGATCGTCGACGAATGCCACCACCTGTCTGCGGCGAGTTTTGAAC TTGTCGCGCGCAGAACGAAGGCGCGCTATGTCGTCGGTTTGTCGGCAACCGTCGCCCGAAAAGACGGGCACCATCCCATC ATCTTCATGCAATGCGGCCCCGTACGGCATCAGGTTCATGCCAGATCGCAGGCTGCTGAGAGCGGCATTCGGCATCGGGC GCGCGAGCGTCACACGCGGTTCAAACTGCCTGAAGTGCTTGCGATGGCAGAACGGCCATCGATGCCCGCGATCTATGCCG CTCTGGCTGACGACGACGGTCGAAATGATCAGATATTTGATGATGTGCTGAAGTCGCTCGAAGCGAAACGGTCCCCGATC GTGCTGACCGAGCGCAAAGACCATCTGGATTATCTGCAGCAGCGGTTCTCCAAGTTTGCGAAAAACCTGGTCGTGCTGCG CGGCGGCATGTCGGCAAAGGACCGGAAGGCCGCCGCCGCCGCGTTGAATGTCGCGGATCGCGAAGAACGGCTGATCCTTG CGACCGGACGCTACATCGGTGAGGGGTTTGACGACACCCGGCTCGATACCTTGTTCCTGACGATGCCGATCGCGTGGAAG GGCACGCTGGCGCAATATGTTGGTCGCTTGCACCGACAGCATGACGGCAAGAAAGATGTTCTGGTCGTGGATTACGTGGA TAGCGCGGTGCCTGTTCTTGCCAGAATGGCGGCAAAACGGCGTTCCGGGTACCGCGCGCTTGGATATGTGATGGAATAG Protein sequence : MTSPSNSHPGSAAAAGGMLTAEPFGRYGRREGTTRRKSQVVDRSGTATELARVRARLAELDAEQRRLLQELSALEARETA EIAAQAKRPAFENAPVTNASSSGEKVELFRSLFAGRPDVFPVRWENQKTGRAGYSPACFNEWVRGICGKPTVKCGDCKHQ RFIPPDASVIERHLRGGEGPSADFVAGVYPLLRDDTCWFLAADFDKDSWAEDAGALLETCRAKGVPAALERSRSGNGGHV WIFFGEPVSARIARQLGSALITETMERRPEIGFASYDRLFPNQDTMPVGGFGNLIALPLQHSARKVGNSVFLNQDLQPFE DQWAYLSTLPRMSAEAVANLVAAAEASGQVLAVRMPVDDENADEPWKMSPSRRPKTKPADVVVPPNIKVTVADQVYIDRT GLPSAMIAQLVRVAAFQNPEFYRAQAMRLPTFGKPRVVSCAELHPRHIALPRGCFDEAVEVLTEHGAKAELDDQRSDGTP LPNTVRFLGELRPPQQRAFESLTAHDTGVLAATTAFGKTVVASALIGHRARNTLVLVHRRELLDQWVERLKTFLQIDPKQ IGTIGGGRRKPTGMIDVALIQSLVRSGEVDDIVADYGQLIVDECHHLSAASFELVARRTKARYVVGLSATVARKDGHHPI IFMQCGPVRHQVHARSQAAESGIRHRARERHTRFKLPEVLAMAERPSMPAIYAALADDDGRNDQIFDDVLKSLEAKRSPI VLTERKDHLDYLQQRFSKFAKNLVVLRGGMSAKDRKAAAAALNVADREERLILATGRYIGEGFDDTRLDTLFLTMPIAWK GTLAQYVGRLHRQHDGKKDVLVVDYVDSAVPVLARMAAKRRSGYRALGYVME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1129 | NP_286664.1 | helicase | Not tested | TAI | Protein | 1e-173 | 49 |
| Z1568 | NP_287072.1 | helicase | Not tested | TAI | Protein | 1e-173 | 49 |
