Gene Information

Name : JCM7686_pAMI8p027 (JCM7686_pAMI8p027)
Accession : YP_008408411.1
Strain :
Genome accession: NC_022050
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 27628 - 27981 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGATCTTCCCGTCGAACCCGGTTCGGATCATGGTCGCGACGAAGGCGATCGACTTCCGGAAAGGGCATGATGGTTTGGC
GGCGCTGGTGTCGTCGGTGCTGCGCAAGGATCCGTTCACCGGCACGGTCTTTGTGTTCCGCTCGCGCCGCGCTGATCGAT
TGAAGCTGCTCTATTGGGACGGCACTGGTCTGGTGCTGGCCTACAAGCGACTGGAAGGGGGAGGCTTCACTTGGCCTGCT
ATCAAAGATGGGCTGATCGCGCTGAACCATGCCCCGTTCGAGGCGCTGTTTGCCGGACTGGACTGGCGCAAGGTTAAGGC
GTTGGAGGCACGCCCGCCAGCTGCGGCGGAGTGA

Protein sequence :
MIFPSNPVRIMVATKAIDFRKGHDGLAALVSSVLRKDPFTGTVFVFRSRRADRLKLLYWDGTGLVLAYKRLEGGGFTWPA
IKDGLIALNHAPFEALFAGLDWRKVKALEARPPAAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-19 48
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-16 44
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-16 44
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-11 43
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 6e-17 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 6e-17 43
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-16 43
unnamed AAC31493.1 L0014 Not tested LEE Protein 7e-17 43
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 7e-17 43
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-16 43
unnamed AAL99258.1 unknown Not tested LEE Protein 7e-17 43
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-16 43
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 7e-17 43
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-16 43
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-16 43
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-16 43
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-16 42
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 2e-17 42
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 2e-17 42
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-17 42
unnamed AAL08461.1 unknown Not tested SRL Protein 2e-16 41
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 6e-17 41
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 6e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1517 Protein 8e-12 43
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1709 Protein 3e-17 43
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1698 Protein 7e-17 43
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG0792 Protein 3e-17 43
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1665 Protein 6e-17 42
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1737 Protein 4e-18 42
JCM7686_pAMI8p027 YP_008408411.1 transposase VFG1052 Protein 8e-17 41