Gene Information

Name : JCM7686_pAMI4p255 (JCM7686_pAMI4p255)
Accession : YP_008408264.1
Strain :
Genome accession: NC_022049
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 293165 - 293854 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
TTGGACGCCAATGGCCTTGGTGCTTTCGCGTCGGTGCAGGACGTCACCAAGACCTATTTCAAGGGCAAGATCCGTGTTCC
TGTCCTCAATCACATCAGCTTCGAGGTTCAACCCGGGGAAGTTTTGGCGATCATGGGCACGTCGGGCAGCGGTAAAACCA
CGCTGCTCAACCTGCTTGGCGGGATCGATCGCCCCGATACAGGCCGCATCCAGGTGGCGGGCAGCAATCTGACGGCCTTG
GGTGACGGGGCTTTGGCGCGGTGGCGCAGCCGGAATGTCGGGTTCATCTTCCAGTTCTACAACCTGCTTCCCGCACTCAG
CGCCGCGCGCAACGTCGAATTGCCTCTGCTTCTGTCAAGCTTGAACGCCTCAGAGCGGCGCTCGCGGGTGATGGAGGCGC
TCAACCTGGTCGGCCTGTCAGATCGCGCCGAACATCGTCCCGAGGAACTGTCCGGGGGCCAGCAGCAACGCGTCGCAATT
GCCCGCGCCTTGGTCGCGGAGGGCGACCTGCTGCTCTGCGATGAGCCGACCGGAGACCTCGATCGGGAATCGTCGATCCA
GGTGATGGATCTCTTTCGGGTCCTGAACCAGGAATTCGGAAAGACCATCGTCATGGCGACCCACGATGCGGATGTCGCCA
ATTGCGCCCATCGCACCATGCATCTGACCCGAGCCGAAAGCTCAAGCTGA

Protein sequence : 
MDANGLGAFASVQDVTKTYFKGKIRVPVLNHISFEVQPGEVLAIMGTSGSGKTTLLNLLGGIDRPDTGRIQVAGSNLTAL
GDGALARWRSRNVGFIFQFYNLLPALSAARNVELPLLLSSLNASERRSRVMEALNLVGLSDRAEHRPEELSGGQQQRVAI
ARALVAEGDLLLCDEPTGDLDRESSIQVMDLFRVLNQEFGKTIVMATHDADVANCAHRTMHLTRAESSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI4p255 YP_008408264.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 2e-40 47
JCM7686_pAMI4p255 YP_008408264.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 4e-42 46
JCM7686_pAMI4p255 YP_008408264.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 5e-38 42
JCM7686_pAMI4p255 YP_008408264.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 2e-40 42