Gene Information

Name : M640_p00040 (M640_p00040)
Accession : YP_008407056.1
Strain :
Genome accession: NC_022046
Putative virulence/resistance : Resistance
Product : cadmium transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5655 - 7772 bp
Length : 2118 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGTGAGAAAATGACCGAAAAAACCTATCGAATAGAAGGATTAAGCTGTACAAATTGTGCAGGTAAATTTGAAAAAAA
TGTAAAGCAGTTGCCAGGAGTTACGAGTGCAACAGTAAACTTTGGTGCAAGTAGGATTTCAGTAGAAGGCCAAACAACAA
TTGAAGAACTCGAAGAAGCGGGAGCCTTCGAAAATCTTATCATTCGTGATGATCAAGAAAATGATGAACAAGTTAGATCA
AAAGAGTCTTTTATTAAACGGAATATCGCTTTAATCATCTCTCTTGGTTTTATACTTGTTGCTGTGATTTCCCAACTATC
ATTGGGCGAAGATCATTTATTAACGAAAGCTCTTTATATATTGGCAATAATAATTGGTGGATTTGATTTATTTAAAGAAG
GGTTCTCTGATTTGATCAAATTGGACTTCTCCATGGAATCTTTAATGACTATTGCAATTATTGGGGCCGCATTTATTGGA
GAATGGGCCGAAGGTTCTATTGTAGTAATACTATTTGCTATTAGCGAAGCTTTGGAACGATTTTCAATGGATAAAGCAAG
ACAGTCGATTCGTTCTCTTATGGATATAGCTCCCAAAGAAGCTCTTATCAGGAGAAACAATGTAGAGCAATTAGTCAGTG
TCGATAAAATCGATATCGACGATATTATGATCATTAAACCGGGACAAAAAATAGCCATGGATGGGCTTGTTATCAACGGT
CATTCTTCAGTAAATCAAGCAGCAATAACAGGAGAATCGGTTCCTGTTGAAAAACAGTTAGATGATGAAGTGTTTGCAGG
AACACTAAATGAAGAAGGTGTTCTTGAAGTCAAAGTAACAAAAAAAGTAACGGATACAACGATTGCCAAAATCATTCACT
TAGTTGAAGAAGCGCAAGGAGAACGAGCTCCTGCACAAGCCTTTGTAGATAAATTTGCAAAATACTATACGCCATTCATA
ATTATTATGGCCCTTTTGATAGTGGTTGTTCCTCCGCTATTCTTTGGTGGTGACTGGAATAAATGGCTTTACCAAGGGTT
ATCCATTTTAGTTGTCGGATGTCCTTGTTCATTAGTGATCTCAACACCTGTTTCAATTGTTTCGGCTATTGGTAATGCAG
CAAAAAATGGTGTTTTAGTAAAAGGTGGAGTCTATCTGGAAGAAATTGGTCATTTGAGAGCAATTGCTTTCGATAAGACT
GGAACCTTAACAAAAGGAAAGCCTGTCGTAACGGATTTCATTGCAACCAGTTCTGAAACTGATATAAATTATCTATCGAT
TATTTCATCGTTGGAATCTCTTTCTCAACACCCATTAGCTTCTGCTATTTTAAACGAAGCGGATAAAACTAATGTGGATT
ACAAGTCAATACAAATCGAGGATTTCCAATCTATCACAGGTAAAGGACTTACAGGTATACATCAAAACATACGTTACTAT
ATTGGAAGCCCTAAACTGTTTTCTGCATCAGTAATCGAAGAAACAGCGGTCAAAGTACAATACAGACAATTTCAAGAACA
AGGGAAAACCGCCATGTATTTCGGTACTGACGAACAAATTTTAGGAGTAATTGCTGTCGCGGATGAAGTAAGAGATTCAA
GTGCTGCCGTTATTTCTGAACTCCACAAGTTGTCAATTGAACACACTATTATGCTTACTGGTGATAATACTAAAACCGCT
GAATCTATTGGTAAGCAATTAGGTGTGACTGAAATAAAAGGAGATCTAATGCCTCAAGAAAAATTAGATTCGATTAAAGC
GTTGCGGACAACTTATAATAAAGTAGCAATGGTGGGCGACGGCATTAATGATGCACCAGCATTAGCTGCATCGACGGTTG
GTATTGCAATGGGCGGTGCAGGAACAGATACGGCTCTCGAAACTGCTGATGTTGCTCTAATGGGCGACGATTTACAAAAA
TTACCATTCATTGTTAGACTTAGCCGTCAAACTCTAAAAGTAATTAAGCAAAATATCACCTTCTCATTAGGTATAAAACT
ATTAGCTCTACTACTAGTCATACCAGGTTGGCTAACACTATGGATTGCTATTGTAGCAGATATGGGAGCAACGCTTTTAG
TAACATTAAACGGATTACGATTGATGAAAGTTAAATAA

Protein sequence :
MSEKMTEKTYRIEGLSCTNCAGKFEKNVKQLPGVTSATVNFGASRISVEGQTTIEELEEAGAFENLIIRDDQENDEQVRS
KESFIKRNIALIISLGFILVAVISQLSLGEDHLLTKALYILAIIIGGFDLFKEGFSDLIKLDFSMESLMTIAIIGAAFIG
EWAEGSIVVILFAISEALERFSMDKARQSIRSLMDIAPKEALIRRNNVEQLVSVDKIDIDDIMIIKPGQKIAMDGLVING
HSSVNQAAITGESVPVEKQLDDEVFAGTLNEEGVLEVKVTKKVTDTTIAKIIHLVEEAQGERAPAQAFVDKFAKYYTPFI
IIMALLIVVVPPLFFGGDWNKWLYQGLSILVVGCPCSLVISTPVSIVSAIGNAAKNGVLVKGGVYLEEIGHLRAIAFDKT
GTLTKGKPVVTDFIATSSETDINYLSIISSLESLSQHPLASAILNEADKTNVDYKSIQIEDFQSITGKGLTGIHQNIRYY
IGSPKLFSASVIEETAVKVQYRQFQEQGKTAMYFGTDEQILGVIAVADEVRDSSAAVISELHKLSIEHTIMLTGDNTKTA
ESIGKQLGVTEIKGDLMPQEKLDSIKALRTTYNKVAMVGDGINDAPALAASTVGIAMGGAGTDTALETADVALMGDDLQK
LPFIVRLSRQTLKVIKQNITFSLGIKLLALLLVIPGWLTLWIAIVADMGATLLVTLNGLRLMKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 65
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 65
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M640_p00040 YP_008407056.1 cadmium transporter BAC0298 Protein 2e-112 47
M640_p00040 YP_008407056.1 cadmium transporter BAC0092 Protein 1e-97 42