Gene Information

Name : M643_p00280 (M643_p00280)
Accession : YP_008406938.1
Strain :
Genome accession: NC_022045
Putative virulence/resistance : Resistance
Product : cadmium transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 42822 - 44957 bp
Length : 2136 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCAGAAAAGACTGTTTATAGAGTTGATGGATTAAGCTGTACAAATTGTGCGGCCAAATTTGAACGGAATGTAAAAGA
AATTGAGGGTGTAACAGAAGCTATTGTAAACTTTGGCGCATCAAAAATCACGGTAACAGGTGAAGCAAGTATTCAACAAG
TTGAACAGGCTGGAGCATTTGAACACTTGAAAATCATTCCAGAGAAAGAATCTTTTACTGATCCAGAGCACTTTACTGAC
CATCAATCGTTTATTAGAAAAAATTGGCGATTATTGCTTTCTGGATTATTTATTGCAGTGGGGTATGCGTCACAGATCAT
GAATGGGGAGGACTTTTATCTTACTAATGCACTATTTATTTTTGCAATTTTCATAGGAGGCTATTCTCTCTTTAAGGAAG
GATTCAAAAATTTATTGAAGTTTGAATTTACAATGGAGACACTGATGACAATAGCTATTATTGGAGCTGCTTTCATTGGT
GAATGGGCAGAAGGATCCATTGTGGTGATTCTATTCGCAGTAAGCGAGGCGCTTGAGCGTTACTCGATGGATAAGGCACG
ACAATCTATTCGTTCCCTAATGGATATTGCGCCAAAAGAAGCACTTGTGAGACGCTCGGGCACCGACAGAATGGTTCATG
TAGATGACATTCAAATTGGCGACATTATGATTATAAAACCTGGTCAAAAAATTGCGATGGATGGTCACGTTGTGAAAGGT
TATTCAGCCGTCAATCAAGCAGCGATTACTGGTGAATCTATTCCTGTTGAAAAAAACATCGATGATTCCGTTTTTGCTGG
AACGTTAAATGAAGAAGGATTGCTTGAAGTTGCGGTCACAAAACGAGTAGAAGATACCACGATTTCAAAAATTATTCACT
TAGTTGAGGAGGCACAAGGTGAACGTGCTCCAGCTCAAGCATTTGTTGATACATTTGCTAAATATTATACGCCAGCCATT
ATTGTGATCGCCGCACTGATTGCAACAGTACCGCCATTGCTGTTTGGTGGAAACTGGGAAACGTGGGTGTATCAAGGGTT
ATCTGTATTAGTGGTTGGGTGTCCTTGCGCCTTAGTTGTTTCAACTCCTGTTGCCATCGTCACCGCCATTGGAAATGCAG
CTAAAAATGGCGTATTGGTAAAAGGTGGTGTGTATTTAGAAGAAATTGGTGGGCTAAAAGCCATTGCGTTCGATAAAACT
GGTACCTTGACAAAAGGTGTGCCGGTGGTCACTGATTATATTGAACTAACAGAAGCCACAAACATTCAACATAATAAAAA
CTATATCATCATGGCAGCACTGGAACAATTATCTCAACACCCCCTTGCTTCAGCCATTATTAAGTATGGAGAAACGAGAG
AAATGGATTTAACTAGTATTAATGTGAACGATTTTACATCCATCACAGGAAAAGGGATTAGAGGAACTGTAGATGGTAAC
ACCTATTATGTTGGAAGTCCCGTTCTATTTAAGGAATTACTAGCATCGCAATTTACTGACTCCATTCATCGACAAGTGAG
TGACTTACAACTTAAAGGGAAGACTGCTATGCTTTTTGGAACAAATCAGAAACTGATTTCTATAGTGGCAGTTGCTGACG
AGGTTAGGTCATCCAGTCAACATGTTATTAAACGACTTCATGAGCTGGGGATTGAAAAAACTATTATGTTGACTGGCGAT
AACCAAGCCACAGCGCAAGCAATTGGCCAACAGGTGGGTGTTTCTGAAATAGAAGGTGAGTTAATGCCCCAAGATAAACT
AGATTACATTAAACAGTTGAAAATAAACTTTGGTAAAGTGGCCATGGTTGGAGACGGTATTAATGATGCGCCAGCCCTAG
CAGCGGCCACGGTTGGAATTGCAATGGGCGGAGCTGGAACTGACACAGCCATTGAAACAGCTGATGTTGCCTTAATGGGA
GACGACTTACAAAAATTACCTTTCACGGTAAAGTTGAGTAGAAAAACACTCCAAATTATTAAGCAAAATATCACATTTTC
CTTGGTCATCAAACTGATTGCTCTTTTGCTAGTCATTCCAGGGTGGTTAACATTATGGATTGCAATTATGGCGGATATGG
GTGCGACTCTTTTAGTCACGTTAAATGGCTTACGATTAATGAAAGTGAAAGATTAA

Protein sequence :
MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFEHLKIIPEKESFTDPEHFTD
HQSFIRKNWRLLLSGLFIAVGYASQIMNGEDFYLTNALFIFAIFIGGYSLFKEGFKNLLKFEFTMETLMTIAIIGAAFIG
EWAEGSIVVILFAVSEALERYSMDKARQSIRSLMDIAPKEALVRRSGTDRMVHVDDIQIGDIMIIKPGQKIAMDGHVVKG
YSAVNQAAITGESIPVEKNIDDSVFAGTLNEEGLLEVAVTKRVEDTTISKIIHLVEEAQGERAPAQAFVDTFAKYYTPAI
IVIAALIATVPPLLFGGNWETWVYQGLSVLVVGCPCALVVSTPVAIVTAIGNAAKNGVLVKGGVYLEEIGGLKAIAFDKT
GTLTKGVPVVTDYIELTEATNIQHNKNYIIMAALEQLSQHPLASAIIKYGETREMDLTSINVNDFTSITGKGIRGTVDGN
TYYVGSPVLFKELLASQFTDSIHRQVSDLQLKGKTAMLFGTNQKLISIVAVADEVRSSSQHVIKRLHELGIEKTIMLTGD
NQATAQAIGQQVGVSEIEGELMPQDKLDYIKQLKINFGKVAMVGDGINDAPALAAATVGIAMGGAGTDTAIETADVALMG
DDLQKLPFTVKLSRKTLQIIKQNITFSLVIKLIALLLVIPGWLTLWIAIMADMGATLLVTLNGLRLMKVKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 70
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 68
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M643_p00280 YP_008406938.1 cadmium transporter BAC0298 Protein 8e-122 47
M643_p00280 YP_008406938.1 cadmium transporter BAC0092 Protein 7e-100 41