Gene Information

Name : JCM7686_pAMI6p160 (JCM7686_pAMI6p160)
Accession : YP_008406872.1
Strain :
Genome accession: NC_022044
Putative virulence/resistance : Virulence
Product : type VI secretion system protein ImpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190661 - 191179 bp
Length : 519 bp
Strand : -
Note : -

DNA sequence :

ATGGTATCGGATAAATCAACGGACTTCATCAAACGAAACCGCCCGCCGCGGGTGAACATTTCGTATGAAGACCCGTATGA
CAGCGAAAAAATGGTCGAGCTTCCCTTTGTCATGGGGATGATGTCCGACCTGTCCGGCAATGCTTCGCAGGTCGAGAAAA
AGCCGATGGAAGAACGCGATTTCGTCGACGTGACCGCGGCGACGCTGGACGAGTTCATCGACTCGGTTCGCCCGGGACTT
GCCTTCAACGCCGAGAACCGTCTGGGCGATGGCGAGGGCCGCATGGGCGTGTCGCTTGAGTTCAGCTCGATGGACGATTT
CAACCCGGCCAATGTCGCGCGTCAGGTTCCGGCGCTCAAGAAGCTTCTGGAAGCGCGCGAGCATCTGGCCAACCTGCAGC
GTTACATGAACTCGAAGCCGAAGGCGCAAGAGCAGATCCGTCAGCTCTTGAACGATCCCGACCTGATGGCGGCCTTGGCC
GAACGCAGCAAGGCCGAAGCCAAGGGTGAGGACGAATAA

Protein sequence :

MVSDKSTDFIKRNRPPRVNISYEDPYDSEKMVELPFVMGMMSDLSGNASQVEKKPMEERDFVDVTAATLDEFIDSVRPGL
AFNAENRLGDGEGRMGVSLEFSSMDDFNPANVARQVPALKKLLEAREHLANLQRYMNSKPKAQEQIRQLLNDPDLMAALA
ERSKAEAKGEDE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-33	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
JCM7686_pAMI6p160	YP_008406872.1	type VI secretion system protein ImpB	VFG2069	Protein	8e-33	45