|
Name : JCM7686_pAMI6p154 (JCM7686_pAMI6p154) Accession : YP_008406866.1 Strain : Genome accession: NC_022044 Putative virulence/resistance : Virulence Product : type VI secretion system ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 182255 - 184999 bp Length : 2745 bp Strand : - Note : - DNA sequence : ATGACCGCGATCAGCATCGAGAAATTTGCCGGCAAGATGAACCGGCTGGGCTATGACGCCTTTCTGCAGGCGATGCGCCA TGCGCGCGGCGAGGGCAACCGCAATGTCGAGCTGTGTCATTGGCTGTTTTATGCGCTCTCCGATCAGGATTGCGACATCT CGGTCACCCTGCGCGAGCTGAAGCTGGATCGGGGCCGCGTGCTCAAGGATCTCGATCGCGCCATGGCCGGGCTCAAGAAG AACGTGACCGAGGTGCCGGGCATTGCCGATAGTCTGGCCGACGGGCTCAACCACGCCTGGACCTATGCCACGCTCTTTTT CGGCGAGACCCAGATCCGCACCGGCCATCTGCTGGTGTCCTTGCTCAACGACGGCGGGCTGCGGCGCGAGCTGGTGATGT ATTCCCCGGTTTTCGCCGAGATTTCGGTCGATCAGCTGGGCAAAGAGGCACGCCAGCTCTGGTCCGGCTCGGTCGAGGAA GAGCTGCGGCCGATGGATGGCTCGGGGCTGACGGCGGCGGGCACCGGCACGCGGCCCGACAGCGCGACGACGGCGCTTGG CCGCTTCTCGGTCGATATGACGGCGGATGCGGCGGCGGGCAAGATGGACCCGGTGCATGGCCGTGACGACGAGATCCGCC AGATCATCGACGTGCTGATGCGCCGCCGCCAGAACAACCCGATCCTGACGGGCGAGGCCGGTGTCGGCAAGACCGCCGTG GTCGAAGGTTTCGCGCAGCGTCTGGCCTCGGGCGAGGTGCCGCCCGCGCTGCAAGGGATGCGGCTTCATATGCTCGACAT CGGCGCGATGCAGGCGGGCGCGAGCATGAAGGGCGAATTCGAGCAGCGCCTGCGCTCGGTTATCGACGAGGTGCAAAGCT CGCCGACCCCGATCATTCTTTTCATCGACGAGGCTCATACGCTGGTGGGTGCGGGCGGCGCGGCCGGGACGGGCGATGCG GCGAACCTTCTCAAACCGGCGCTGGCGCGCGGGACGTTGCGCACCATCGGCGCGACGACCTGGGCCGAATATCGCAATTA TTTCGAGAAAGACCCGGCGCTGACCCGCCGTTTCCAGCCGGTTCAGGTCGACGAGCCGGGGATCGAGCAGGCCTGTTACA TGATCCGCGGCATCCTTGGCCCGATGGAGGCCCATCACAAGGTTCGCATTTCCGACGAGGCGGTGATTGCGGCGGTGAAG CTGTCGGCGCGCTATATCCCGGCGCGGCAACTGCCTGACAAGGCGGTCTCGCTGCTGGATACCGCCTGCGCGCGGGTCGC GGTCAGCCAATCCTCGACGCCCGCGCGCATCGCCGATCTGCGCGATGCGATCAATGCGCTGGACACGGAAATCGCCGCCA AGGTCGCTGCCGAGGATCTGGGCGAGCGTGCCGATGACCGTCTGGCCGAGGCACGCGCGGATCGCGACGCCAAGGCGCTG GAACTCACCGCAATCGAGGCGAAATTCGAGGAGGAAAAGGCGGTGGTCGATGCCATCGTCGATCTGCGCAAACGCCTTGC CGAAGAGGCGGGTGAGGATTTCGACGCCGATGCCGTGCGTGCCGAAATGACCGCGAAAATGGCCGATCTCGCCGCGACCC ATCCCGATGAGCGCATGGTTTACGCCCATGTCGATGAACAGGCGGTGGCCAGCGTCATCAGCGATTGGACCGGCATTCCC GCAGGCCGCATGGTCGCCGATGAATTGCAGGCGATCCTCGGTCTGGCCGATCATCTGAAAGAGCGAGTCATCGGGCAGGA TCACGGGCTGCAGATGATCGCGAAACGGGTCGAGACCAGCCGCGCCGGTCTGGGCAACCCGAACAAGCCGATCGGGGTTT TCATGCTCGCCGGTCCCTCGGGCGTCGGTAAGACCGAGACTGCGCTCGCGCTCGCCGAACAGCTTTATGGCGGCGAGCAG AATGTGATCACAATCAACATGTCCGAATTCCAAGAGGCCCATTCGGTCAGCCTGCTGAAAGGCGCGCCGCCCGGCTATGT CGGCTATGGCGAGGGCGGGCGTCTGACCGAGGCGGTGCGGCGCAAACCCTATTCGGTCGTGCTGCTCGACGAGATCGAAA AGGCCCATCCCGATGTCCATGAGCTCTTCTTTCAGGTCTTCGACAAGGGCATGATGGAGGACGGCAACGGACGTGCCATC AACTTCCGCAACACCTTGATCTTGCTGACCTCCAACGTCGGCACCGAGGTCATCATGCGCATGGCCGAGGGTGGCGAAAC GACGCCCGATCTCGAGGTTTTGGATACGCGGATGAAGCCGGAACTGCTCAAGGTCTTCCCGCCCGCGCTTTTGGGCCGGA TCGTCACCATTCCCTATTTCCCGCTGAGCCGCGAGGTTCTGGGCGGGATCACCCGGCTCAAGCTCGGCGCGATCGTCAAG CGGATGCGCGATGCCCATGGCGCGCGGCTGTCCTATAGCGACGCGGTCTTGGATTACATCGTCGAGCAATGCCGCGATCC CGACAGCGGCGGGCGGATGGTTGATAACATCATCACCAATTCGATCCTGCCCGATCTCTCGCGGCAAGTGCTGGCGCGGA TGGTCGAAGGCGGCGCGATGGAGGATGTTCGCATCGAGCTGAAGGACGGCGGCTATGACTATGTCTTCGGCGCCGCTCGT CCCGCCGTTGCCGAAGCTGCGCCTGAGGCTGGGGCGGAGAAGCCCGCCCGCAAGAAGCGCGCGAAAAAGGCCGAAGTGGA CGCCGATCTCGAGGCCGAGCTTTAA Protein sequence : MTAISIEKFAGKMNRLGYDAFLQAMRHARGEGNRNVELCHWLFYALSDQDCDISVTLRELKLDRGRVLKDLDRAMAGLKK NVTEVPGIADSLADGLNHAWTYATLFFGETQIRTGHLLVSLLNDGGLRRELVMYSPVFAEISVDQLGKEARQLWSGSVEE ELRPMDGSGLTAAGTGTRPDSATTALGRFSVDMTADAAAGKMDPVHGRDDEIRQIIDVLMRRRQNNPILTGEAGVGKTAV VEGFAQRLASGEVPPALQGMRLHMLDIGAMQAGASMKGEFEQRLRSVIDEVQSSPTPIILFIDEAHTLVGAGGAAGTGDA ANLLKPALARGTLRTIGATTWAEYRNYFEKDPALTRRFQPVQVDEPGIEQACYMIRGILGPMEAHHKVRISDEAVIAAVK LSARYIPARQLPDKAVSLLDTACARVAVSQSSTPARIADLRDAINALDTEIAAKVAAEDLGERADDRLAEARADRDAKAL ELTAIEAKFEEEKAVVDAIVDLRKRLAEEAGEDFDADAVRAEMTAKMADLAATHPDERMVYAHVDEQAVASVISDWTGIP AGRMVADELQAILGLADHLKERVIGQDHGLQMIAKRVETSRAGLGNPNKPIGVFMLAGPSGVGKTETALALAEQLYGGEQ NVITINMSEFQEAHSVSLLKGAPPGYVGYGEGGRLTEAVRRKPYSVVLLDEIEKAHPDVHELFFQVFDKGMMEDGNGRAI NFRNTLILLTSNVGTEVIMRMAEGGETTPDLEVLDTRMKPELLKVFPPALLGRIVTIPYFPLSREVLGGITRLKLGAIVK RMRDAHGARLSYSDAVLDYIVEQCRDPDSGGRMVDNIITNSILPDLSRQVLARMVEGGAMEDVRIELKDGGYDYVFGAAR PAVAEAAPEAGAEKPARKKRAKKAEVDADLEAEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-174 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| JCM7686_pAMI6p154 | YP_008406866.1 | type VI secretion system ATPase | VFG2076 | Protein | 0.0 | 55 |
| JCM7686_pAMI6p154 | YP_008406866.1 | type VI secretion system ATPase | VFG2084 | Protein | 5e-141 | 42 |
