Gene Information

Name : JCM7686_pAMI5p118 (JCM7686_pAMI5p118)
Accession : YP_008406566.1
Strain :
Genome accession: NC_022043
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 132670 - 133362 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGATCCTGATTGTTGAAGATGATGACATGCTGCGCGACGGGCTGGCGGTCGGTCTTCGGCTGGCCGGGTTCTCGCC
CGATGCGGTGGCGACGCTCGCAGATGCGCGGCTCGCCCTTGCCGCCGGGCCGTTTGAGGCGATGGTGCTGGATCTGATGC
TGCCCGATGGCACGGGCTCGGATCTTCTGCGCGAGCTGCGCGGGGCGGGAAACCTCCTGCCCGTGCTCATCCTGACCGCG
CGCGATCAGCTTGGGGACCGGGTGGCCGGGCTCGATGCGGGCGCCGATGATTATCTCGGCAAGCCCTTCGAGCTTGAGGA
GCTCGCCGCGCGCCTGCGCGCCATTTTGCGCCGGGGACAGGGGCGCGCCGACAGCCATCTGCGCTGGAACGGGCTGACCC
TCGATCCCGCGCGGATGCAGGGCGAGATCCATGGCAGCGCGGTCAGCTTCTCGCATCGCGAATTCACCTTGCTGCAGGCG
CTTCTGGAACGGCCCGGCGCGGTCTTGTCGAAAGCCTGGCTCGAGGACCGCCTTTACGGCTGGCAGGAGGAGGTCGAGAG
CAACACGGTCGAGGTCCATATCCACAAGCTGCGTGCGAAACTCGGCCCAGCCTTCATCGAGACCATTCGCGGCGCAGGCT
ACCGCGTCGCCGCCGAGCGCGAGGCCGCTTTGCCTGCGGCGCTGCAGCCATGA

Protein sequence : 
MRILIVEDDDMLRDGLAVGLRLAGFSPDAVATLADARLALAAGPFEAMVLDLMLPDGTGSDLLRELRGAGNLLPVLILTA
RDQLGDRVAGLDAGADDYLGKPFELEELAARLRAILRRGQGRADSHLRWNGLTLDPARMQGEIHGSAVSFSHREFTLLQA
LLERPGAVLSKAWLEDRLYGWQEEVESNTVEVHIHKLRAKLGPAFIETIRGAGYRVAAEREAALPAALQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-29 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI5p118 YP_008406566.1 two component transcriptional regulator BAC0487 Protein 9e-28 43
JCM7686_pAMI5p118 YP_008406566.1 two component transcriptional regulator BAC0197 Protein 2e-23 42
JCM7686_pAMI5p118 YP_008406566.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI5p118 YP_008406566.1 two component transcriptional regulator VFG0473 Protein 3e-32 47