Gene Information

Name : JCM7686_pAMI5p011 (JCM7686_pAMI5p011)
Accession : YP_008406459.1
Strain :
Genome accession: NC_022043
Putative virulence/resistance : Virulence
Product : iron complex transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 11346 - 12119 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCTTTATTCGCTTACCGATGTCAGCTTTCAGCTTCCCGAGCGCAAGCTGCTGACCGATCTGACGCTTGATCTGCC
TGCGGGCAAGGTCGTCGGGCTGATCGGGCATAATGGCTCGGGGAAATCGACGCTGCTGAAACTGCTCGCCCGCCAGCTGC
GCCCGAGCGCCGGTGGGATCAGCTTTGAGGGCCGCGCGCTTCGCGATTGGCCGGGCCGCGACTTTGCCCGCCGCATCGCC
TATCTGCCCCAAGACCCGCCGCCCGCCACCGGGCTGACCGTCCGCGATCTGGTGGCGATGGGGCGCTATCCCTGGCATGG
CGCGCTTGGGCGCATGAAGGCCGAGGATCACGACCGCATCGACGAGGCCATGACGCTGACCGATGTCGCAGCTTTCGCGA
CCCGACAGGTCCAGAGCCTTTCGGGAGGCGAGCGCCAGCGCGTCTGGCTGGCCATGCTGGTCGCGCAGGAAGCTGGGGCG
TTTTTGCTCGACGAGCCGATCTCGGCGCTGGACATCAGCCATCAGGTCGAGGTGCTGTCCTTGGTGCGCAAGCTTTCCGA
AGACGGCGGCGCGAGCGTCATCGTCGTGCTTCACGACATCAACATGGCTGCGCGCTATTGCGACGAGATCATCGCGCTGA
AAGGCGGCAGGCTGATCGCGCGCGGCGATGCGCAAACGCTTTTGGCCCGCGATACCCTGCGTGAGATCTATGGTGTCGAG
ATCGCGACCTTCGCCCACCCCCGCAGCGGCGCGCCCATCGCTTATCTCGACTGA

Protein sequence : 
MTLYSLTDVSFQLPERKLLTDLTLDLPAGKVVGLIGHNGSGKSTLLKLLARQLRPSAGGISFEGRALRDWPGRDFARRIA
YLPQDPPPATGLTVRDLVAMGRYPWHGALGRMKAEDHDRIDEAMTLTDVAAFATRQVQSLSGGERQRVWLAMLVAQEAGA
FLLDEPISALDISHQVEVLSLVRKLSEDGGASVIVVLHDINMAARYCDEIIALKGGRLIARGDAQTLLARDTLREIYGVE
IATFAHPRSGAPIAYLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-51 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-46 41
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-40 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-40 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-40 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI5p011 YP_008406459.1 iron complex transport system ATP-binding protein BAC0164 Protein 2e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_pAMI5p011 YP_008406459.1 iron complex transport system ATP-binding protein VFG1042 Protein 2e-46 41