Gene Information

Name : JCM7686_3352 (JCM7686_3352)
Accession : YP_008406219.1
Strain : Paracoccus aminophilus JCM 7686
Genome accession: NC_022041
Putative virulence/resistance : Virulence
Product : iron complex transport system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 3477804 - 3478628 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGACCGACTTTGCGCCGAAGACGTTACCCTCAGCTACGAATCGCGTGAGATTTCGCGCGGGCTGCGTCTGGCGAT
CGCCGATGGCGGCTTCACCGTGATCGTCGGGCCGAATGCCTGCGGCAAGTCGACCCTGCTGCGCGCCTTGGCGCGACTTT
TGCCGCCGGTCGCGGGGCGCGTGGTGCTGGATGGGTGCGACATTCACACCTTTCCGGCGCGTGAGGTGGCGCGTCGTCTG
GGGCTTTTGCCGCAAAGCGCGACCGCGCCCGACGGCATCACCGTCGCCGATCTGGTGGCGCGTGGGCGCTTCCCTCATCA
GCGGTTTTTGCGGCAATGGTCGCCCGAGGATGCCGCAGCGGTTGCCTCCGCCATGGCGGCGACCGGGGTTGCGGATTTCG
CCGAGCGTCCGGTTTCCGAGCTCTCGGGCGGGCAGCGCCAGCGGGTCTGGATCGCGATGGTTCTGGCGCAGGACACGCCG
ATCCTGCTGCTCGACGAGCCGACCACTTTTCTCGACATCGCCCATCAGATCGAGCTGATGGAGCTGCTTGCCGATCTTCA
TGCCGAGGGCCGGACCGTGGTCGCGGTGCTGCATGATCTCAATCAGGCCTGCCGCTATGCGACGCGGCTGGTGGCGATGA
AAGAGGGTCGAATTCTGGCCGAAGGCGCGCCCGAGGCGGTGATGACGCCTGCGCTGGTCGAAGAGGTCTTCGGCCTTGCG
GCGCTGGTCCTGCCCGATCCGGTGGCGGGCACGCCGATGGTCGTGCCGCGGGGGCGCGACCGGACGCGCGCGGGGCAGCA
GGCCGGGCTGGCGCAGGCGGGTTAA

Protein sequence : 
MTDRLCAEDVTLSYESREISRGLRLAIADGGFTVIVGPNACGKSTLLRALARLLPPVAGRVVLDGCDIHTFPAREVARRL
GLLPQSATAPDGITVADLVARGRFPHQRFLRQWSPEDAAAVASAMAATGVADFAERPVSELSGGQRQRVWIAMVLAQDTP
ILLLDEPTTFLDIAHQIELMELLADLHAEGRTVVAVLHDLNQACRYATRLVAMKEGRILAEGAPEAVMTPALVEEVFGLA
ALVLPDPVAGTPMVVPRGRDRTRAGQQAGLAQAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-50 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-56 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-56 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-56 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-51 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-51 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-46 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-46 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-46 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_3352 YP_008406219.1 iron complex transport system, ATP-binding protein BAC0164 Protein 3e-50 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_3352 YP_008406219.1 iron complex transport system, ATP-binding protein VFG0925 Protein 1e-64 58
JCM7686_3352 YP_008406219.1 iron complex transport system, ATP-binding protein VFG1042 Protein 3e-50 50