Gene Information

Name : JCM7686_1818 (JCM7686_1818)
Accession : YP_008404686.1
Strain : Paracoccus aminophilus JCM 7686
Genome accession: NC_022041
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1848943 - 1849614 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGATCCTGATCATCGAAGACGACCCGACCACCGGTGATTTCATCGCCCGGGGGCTGCGCGAAGAGGGCCATGTCGC
TGATCTGTCTCGCAATGGCCGCGACGGACTTTTGGCAGCGCAAAGCGCCGATTTCGACGTGCTGGTCGTCGACCGGATGC
TGCCGGGCCTTGATGGCCTTGCGCTGGTCCGCACCCTGCGCGCGGCGAAAAACCTGACGCCCGTGATCTTTCTGACCGCG
ATGGGCGGGATCGACGACCGCATCGAAGGGCTGAACGCGGGCGGCGACGACTATCTGGTCAAGCCCTTCGCGTTTGGCGA
GCTATCGGCCCGCATTCAGGCCCTCGCCCGCCGCCCGCAGCTGCGCGACGAGGAAACCGTGCTCTCGGCGGGCGATCTGC
GTATGGATCTGATCCGGCGCAAGGTGACGCGCGGCGCGGCGGAAATCGAGTTGCTGCCGCGGGAATTCGCGCTGCTCGAA
TGTCTCTTGCGCCGCAAAGGCCGGGTTCAGACCCGGACCATGCTGCTGGAGGCGGTGTGGGATCTGAACTTCGACCCCCA
GACCAATGTCGTCGAAAGCCATGTCTCGCGGCTGCGCGCCAAGGTCGACAAGCCCTTCGAGACCGAGCTCATCCGCACCG
TGCGCGGCGCAGGCTACCGGATCGAGCCGTGA

Protein sequence : 
MRILIIEDDPTTGDFIARGLREEGHVADLSRNGRDGLLAAQSADFDVLVVDRMLPGLDGLALVRTLRAAKNLTPVIFLTA
MGGIDDRIEGLNAGGDDYLVKPFAFGELSARIQALARRPQLRDEETVLSAGDLRMDLIRRKVTRGAAEIELLPREFALLE
CLLRRKGRVQTRTMLLEAVWDLNFDPQTNVVESHVSRLRAKVDKPFETELIRTVRGAGYRIEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-44 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-44 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0083 Protein 2e-50 49
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0197 Protein 6e-49 49
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0125 Protein 8e-51 48
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0308 Protein 3e-49 48
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0111 Protein 4e-52 47
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0638 Protein 1e-41 46
JCM7686_1818 YP_008404686.1 two-component response regulator BAC0347 Protein 7e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1818 YP_008404686.1 two-component response regulator VFG0596 Protein 2e-44 46
JCM7686_1818 YP_008404686.1 two-component response regulator VFG1390 Protein 1e-34 43