Gene Information

Name : JCM7686_1589 (JCM7686_1589)
Accession : YP_008404457.1
Strain : Paracoccus aminophilus JCM 7686
Genome accession: NC_022041
Putative virulence/resistance : Virulence
Product : manganese/iron transport system, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1579033 - 1579860 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence : 
ATGGACTGGCTCACCCTTCCCTTCTCCTTCCCCTTCATGCGCGATGCGGCGCTGATCGGGATCACCATCTCGATCCCGGC
GGGGCTGATGTCCTGTTATCTCGTCCTCAAGGGCTGGTCCTTGATGGGAGACGCGGTCAGCCATGCGATCCTGCCGGGCG
TGGTCATCGCCTATATGATCGGCGCGCCGCTGCTTCTGGGCGCTTTCGTCGCGGGCATGATCTGTTCGCTGGCGACCGGG
TTCTTGCAGACAAACAGCCGCGTCAAACAGGATACGGTGCTGGGCGTCGTCATGTCGGGCATGTTCGGTCTGGGGGTCGT
GCTTTACACGCAGGTCCGCTCGTCGATCCATCTCGACCATATCCTCTTTGGCAATATGCTGGGGGTCGGGCCGCAGGATC
TGGCGCTGTCGGCCGTGATTTCGGCGGTGGTCGTGCTGGCGCTTTTGGCGAAATGGCGGGACTTCGCGCTGTTGAGCTTT
GATCCGGTGCAGGCGCGGGTTGCGGGGTTGCCGGTCACGCTGCTCCATTACAGGCTCTTGACCATGCTCTCGCTCACGGT
CGTCTCGATGCTGAGCGCCGTCGGCATCATCCTCTCTGTCGCGCTGCTGATCGCCCCCGGCGCCATCGCCTTCCTGATCA
CGCGCAGCCTTGGCCGGATGCTGGTCATGGCGGTGGTGGTCGCGGTCTCGGCCTCGCTCATTGGGGTCTGGGCGAGCTTC
TGGCTCGATTCCTCGCCTGCTGCGACAATTGTGCTGCTGCTCACGCTGATCTTCATCGCGGCCTTCGTCTATCGCCAGAT
CCAAACCCGCCGCCTCAGCGCGGCCTAG

Protein sequence : 
MDWLTLPFSFPFMRDAALIGITISIPAGLMSCYLVLKGWSLMGDAVSHAILPGVVIAYMIGAPLLLGAFVAGMICSLATG
FLQTNSRVKQDTVLGVVMSGMFGLGVVLYTQVRSSIHLDHILFGNMLGVGPQDLALSAVISAVVVLALLAKWRDFALLSF
DPVQARVAGLPVTLLHYRLLTMLSLTVVSMLSAVGIILSVALLIAPGAIAFLITRSLGRMLVMAVVVAVSASLIGVWASF
WLDSSPAATIVLLLTLIFIAAFVYRQIQTRRLSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-65 55
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-65 55
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-65 55
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-65 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-65 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1589 YP_008404457.1 manganese/iron transport system, permease protein BAC0352 Protein 2e-65 55
JCM7686_1589 YP_008404457.1 manganese/iron transport system, permease protein BAC0442 Protein 2e-60 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1589 YP_008404457.1 manganese/iron transport system, permease protein VFG0528 Protein 1e-65 55