Gene Information

Name : JCM7686_1586 (JCM7686_1586)
Accession : YP_008404454.1
Strain : Paracoccus aminophilus JCM 7686
Genome accession: NC_022041
Putative virulence/resistance : Virulence
Product : manganese/iron ABC transporter, substrate binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1576311 - 1577282 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence : 
TTGACAGTTGAGAATCATTCGCAGATGCTTCCGGCAACTTTCGCCAAACCGAGATGGACCATGCCTGCCTTCAAGACTTC
GCTGACCGCCCTCGTCCTTGCGCTGGGAGCCTGCCTCCCCCTGTCCGCCTTCGCCAAAGAGCTGAAAGTCGTGACCACCT
TCACCGTGATCGCGGATATGGCGCAAAACGTCGGGGGGGATCATGCCGAGGTCGTCTCGATCACCAAACCCGGCGCCGAG
ATCCACACTTACGAGCCGACGCCGAGCGATCTGGTGCAGGCGCGCGGCGCGGATCTGATCTTGTGGAACGGGCTGGGGCT
CGAGGCCTGGTTCGAGAAATTTCTCGCCAATCTGGGCGACGTGCCCTCGGCCACGCTGAGCGACGGGCTCGCGCCGATCC
AGATTGGCGGCGGTGCCTATGATGGCAAACCGAACCCCCATGCCTGGATGTCGCTGGAAAGCGCGCTGCTCTATGTCGAC
AATATCGCCAAGGCGATGGCGGCGGCGGATCCCGAAAACGCCGAGGCCTATGCCGCGAATGCCCTCGCCTATAAGGCCAA
GATCTCGGCCACGATCGATCCCTTGCGTGAGGCCGCCCGCGCCTTGCCTGAGGACGACCGCTGGCTCGTGACCTCGGAAG
GCGCGTTCAGCTATCTGGCGCGGGATTTCGGCCTGAATGAGCTTTACCTCTGGCCGGTCAATGCCGATGCGCAGGGCACG
CCCCAGCAAGTTCGCCGCGTCGTCGATCTGATGCGCGAGCACAAGATCCCGGTGATCTTCTCGGAAAGCACGATCTCGGA
CCGCCCGGCCAAGCAGATCGCCTCCGAGACCGGCGCGCAATACGGCGGCGTCCTTTACGTCGACAGCCTCTCCGAGCCCG
ATGGCCCGGTCCCGACCTATCTCGATCTGCTGCGCGTGACCTCAGAGACCATCGTCTCGGGGCTGAAAGGCGGCGATCAT
GACGCGAACTGA

Protein sequence : 
MTVENHSQMLPATFAKPRWTMPAFKTSLTALVLALGACLPLSAFAKELKVVTTFTVIADMAQNVGGDHAEVVSITKPGAE
IHTYEPTPSDLVQARGADLILWNGLGLEAWFEKFLANLGDVPSATLSDGLAPIQIGGGAYDGKPNPHAWMSLESALLYVD
NIAKAMAAADPENAEAYAANALAYKAKISATIDPLREAARALPEDDRWLVTSEGAFSYLARDFGLNELYLWPVNADAQGT
PQQVRRVVDLMREHKIPVIFSESTISDRPAKQIASETGAQYGGVLYVDSLSEPDGPVPTYLDLLRVTSETIVSGLKGGDH
DAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-81 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-81 65
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-81 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-81 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-81 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1586 YP_008404454.1 manganese/iron ABC transporter, substrate binding protein BAC0349 Protein 2e-81 65
JCM7686_1586 YP_008404454.1 manganese/iron ABC transporter, substrate binding protein BAC0439 Protein 3e-78 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1586 YP_008404454.1 manganese/iron ABC transporter, substrate binding protein VFG0525 Protein 2e-81 65