Gene Information

Name : JCM7686_1488 (JCM7686_1488)
Accession : YP_008404356.1
Strain : Paracoccus aminophilus JCM 7686
Genome accession: NC_022041
Putative virulence/resistance : Virulence
Product : capsular polysaccharide transport system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 1486913 - 1487566 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCGAATTTGATAATGTCTCGAAATCGTTCTGGACCGGATCCCAGCGCAAGATCATTCTTGATCAGGCCTCGTTTCG
GGTGGAGCCCGGGCAATCAATCGGCATCCTCGCCCAAAACGGCACCGGCAAGACCACGCTGATTAATATGATGTGCGGGC
TGGAAAAACCGGATGAGGGGATCATCCGCCGCCAATGCCGGGTCTCGTTTCCGCTTGGTTTCATGGGCGGCGTGGTCTCA
AAGCATTCCGCCAATGAAAACTCCCGTTTCATCGCGCGAATCTATGGGCTCGACCCCGATTATGTCGCGGCCTATTGCCG
CTGGCTGACCGATATCGGCGAATATTTCGACATGCCTGTCGGGACTTACAGCTCGGGGATGCGATCGCGCTTCACCTTCG
CGCTGATGCTTGCGCTGGATTTCGACATCTATCTGATTGACGAAGCGATGCCACAATCTACAGATGTGGAATTCAACCGG
AAGGCGGGTGCGGTCCTGTTCGAGCGACTGAAAACCTCGACAGTGGTGATCGTCTCGCACCAAGCCGCCACCATTGAAAA
GTTCTGCCGCTCCGCAGCGGTGATGCGCGACGGTAAATTGTATATGTTCGAAACCCTCGACGAGGCGAAGCAATATTATG
ACTACACCTCCTAA

Protein sequence : 
MLEFDNVSKSFWTGSQRKIILDQASFRVEPGQSIGILAQNGTGKTTLINMMCGLEKPDEGIIRRQCRVSFPLGFMGGVVS
KHSANENSRFIARIYGLDPDYVAAYCRWLTDIGEYFDMPVGTYSSGMRSRFTFALMLALDFDIYLIDEAMPQSTDVEFNR
KAGAVLFERLKTSTVVIVSHQAATIEKFCRSAAVMRDGKLYMFETLDEAKQYYDYTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JCM7686_1488 YP_008404356.1 capsular polysaccharide transport system, ATP-binding protein VFG0258 Protein 3e-39 41
JCM7686_1488 YP_008404356.1 capsular polysaccharide transport system, ATP-binding protein VFG0696 Protein 9e-40 41