Gene Information

Name : smpB (cgp_0916)
Accession : YP_008400934.1
Strain : Corynebacterium glutamicum MB001
Genome accession: NC_022040
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 849031 - 849525 bp
Length : 495 bp
Strand : +
Note : tmRNA-binding protein

DNA sequence :
ATGGCCAAGAAGAAAAAGAAAGTCGACGAAAACAACTCAGTTCTCGCGACCAATCGCAAGGCCCGCCATGACTACCACAT
CATTGATACGTGGGAGGCGGGCGTGGTGCTCTTAGGCACCGAAATCAAATCACTGCGCGAAGGTAAGGTATCCCTCGTGG
ATTCCTTTGCCACCATTGATAACGGAGAAATCTGGCTTCAGCATCTCCACATCCCGCAGTATTCCATGGGCTCCTGGACA
AACCACACGCCCAAGCGCACCCGCAAACTTTTGCTGCACCGCAACGAGATTGATTCCCTGATGGGTAAAGTCCGCGACGG
CAACCGCACGTTGGTTCCGCTCAAGCTTTACCTCAAAAACGGTCGCGTCAAACTCGAACTCGGACTCGCACAAGGTAAGC
AGGATTACGACAAGCGCCAAGATATCAAGCGTCGCACCGAAGAACGCGAAGTCACCCGTGAGCTCGGCCGTCGCATTAAG
GGAATCAACGCGTAA

Protein sequence :
MAKKKKKVDENNSVLATNRKARHDYHIIDTWEAGVVLLGTEIKSLREGKVSLVDSFATIDNGEIWLQHLHIPQYSMGSWT
NHTPKRTRKLLLHRNEIDSLMGKVRDGNRTLVPLKLYLKNGRVKLELGLAQGKQDYDKRQDIKRRTEEREVTRELGRRIK
GINA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-44 73
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-31 57
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-20 42