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Name : capD (cgp_0417) Accession : YP_008400491.1 Strain : Corynebacterium glutamicum MB001 Genome accession: NC_022040 Putative virulence/resistance : Unknown Product : putative dTDP-glucose 4,6-dehydratase, transmembrane protein Function : - COG functional category : - COG ID : - EC number : 4.2.1.46 Position : 366810 - 368624 bp Length : 1815 bp Strand : + Note : Predicted nucleoside-diphosphate sugar epimerases DNA sequence : ATGGCAATAAGCATTGGTAAAGCAGGACAGAACTTAAAAGGGTCAGTGCCTATCGGAAAAGTCCTTTTTCTCATTGATGC CCTTGCCTGGATTTCTGCACTATTTATCGGTGTGGTTTTGCGGTATGAATTCAATCTGAGTTCTATCAACTGGAGTGCGT TTGCATGGTTCGGGCTTGCTGCAGTTATTTTGCAGTTTGTTCTCGGACTTTCTCTCCATCTTTACCGCAAGGGATTACGT CACCTTTTCGGTAGCTTCGAAGATACACTAAACGTTTCTATCTCGGTCATTGTTGTCGGTGTTGTCCTTTGGATCGCCTC ACTATTTGTTGGTCAGCGTTGGGAAATCTCACGCGGTGTCATGCTGCTAGTTATCCCGCTTGCTCTCGTATTCGTATTGG CAGTGCGTTATCTCGCGCGTATGCGAGTTGAGCGTCTTCGTCGTCCGGCTGCGGATTCCACACCAGCATTGATTCTTGGT GGTGGATACATCGGTACCAACCTGATCCAGTGGATGATGTCCGATCCTAAGTCGCCTTTCCGCCCAGTCGGCGTTATTGA TGATAACCCTGAATTAGCATGGCAACGCGTACGTGGTGTGCCGGTTCTTGGCAAGTTTGATGATATCGCCCAAGTTGCAT CAGACACTGGCGCAGAACTTCTTATCGTTGCTATTGGTGATGCCGACTCTGCACTTTTAAGGCGTGTCCAAGATACCGCT AATAAAAATGGTCTTTCAGTAAAGGTAATGCCGGCTATTGACCGCGTCGTTTCTAAGGGCGTTCGTGGAAACGATTTGCG TGATCTCTCTATTGAAGATTTGCTTGGACGTCAACCTGTTGAAACCAATGTTTCAGAAATTACTGGCTATCTAACAGGTA AGCGTGTTCTTGTTACCGGTGCAGGTGGGTCAATTGGTTCCCAGCTATGTACGGAAATTGCCAAATACGGACCTGCTGAG CTTATGATGCTTGATCGCGATGAGACTGGTTTGCAGCAGGTTCTGATTAACGTTGCTGGTAACGGTTTGTTGGATACGGA TGCTGTGGTTCTTGCGGATATCCGCGAAGCAGACGCGATGAAAGAGATTTTTCTCAAGCGTAAACCAGAAGTTGTCTTCC ATGCAGCAGCATTAAAGCACTTGCCAATGCTGGAGCAGTATCCAGATGAGGGCTGGAAAACAAACGTTCTAGGAACTCTT AACGTTCTTGCTGCCGCAGAAGCTGTTGGTGTTGAGACTTTCGTCAATATTTCCACCGATAAGGCAGCTAATCCAACCAG CGTCTTAGGGCACTCAAAGCGAGTCGCTGAAAAGCTGACTGCCTGGTATGGACAGAATTCCACCAGCAAGTACCTATCGG TTCGATTTGGAAACGTCATTGGTAGCCGTGGATCGATGCTCCCGACTTTCACCAGGCTAATCATGGAAGATAAACCGCTA ACAGTGACGCACCCGGATGTCACTAGGTTCTTCATGACAATTCCTGAAGCTTGCCAATTGGTCCTGCAAGCCGGTGGTAT TGGACGTTCCGGCGAGGTTCTCATCCTTGACATGGGTGAGCCTGTAAGCATCCTTGAAATTGCACAGCGCATGATCGCAA TGTCCGGTAAAGATATTGACATCGTGTTCACCGGCCTTCGCGAGGGCGAAAAGATGCACGAAGAGCTGGTTGGTGATGGT GAAACCGAAGATCGTCCATTCCACTCAAAGATTTCGCATGCACATGCAGAAAGCCTCGCTCCTAATAATCTCGATAGAGA TCGATTTATGCAACGTGCTGGAAAACTAGCTTCAACAGATTCGGAGATCATCTAA Protein sequence : MAISIGKAGQNLKGSVPIGKVLFLIDALAWISALFIGVVLRYEFNLSSINWSAFAWFGLAAVILQFVLGLSLHLYRKGLR HLFGSFEDTLNVSISVIVVGVVLWIASLFVGQRWEISRGVMLLVIPLALVFVLAVRYLARMRVERLRRPAADSTPALILG GGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRVRGVPVLGKFDDIAQVASDTGAELLIVAIGDADSALLRRVQDTA NKNGLSVKVMPAIDRVVSKGVRGNDLRDLSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAE LMMLDRDETGLQQVLINVAGNGLLDTDAVVLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQYPDEGWKTNVLGTL NVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAWYGQNSTSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPL TVTHPDVTRFFMTIPEACQLVLQAGGIGRSGEVLILDMGEPVSILEIAQRMIAMSGKDIDIVFTGLREGEKMHEELVGDG ETEDRPFHSKISHAHAESLAPNNLDRDRFMQRAGKLASTDSEII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-70 | 41 |
