Gene Information

Name : cgtR1 (cgp_0330)
Accession : YP_008400418.1
Strain : Corynebacterium glutamicum MB001
Genome accession: NC_022040
Putative virulence/resistance : Virulence
Product : two-component system, transcriptional response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 289106 - 289774 bp
Length : 669 bp
Strand : -
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGCAAGATCCTGCTCGCTGAAGATGACGCCGGCATCGCAGATTTCATCGTTCGTGGCCTCATCCGCGAAGGCTTCGA
ATGCGAGGTCACCGAATCCGGCGCCGAAGCTTTCGCCCGCGCACATTCCGGCGATTTCGATCTCATGGTTTTAGACCTCG
GCCTCCCCCACATGGACGGCACGGATGTCCTAGAGCAATTAAGAAATCTGCAGGTCACGCTACCTATCATTGTGCTCACG
GCACGCACCAACATCGAGGACCGCCTCCGCACCCTCGAGGGCGGCGCCGACGATTACATGCCCAAACCATTCCAATTCGC
AGAATTACTGGCCCGCATCAAACTCCGCCTCGCCAAACACACTCCTCAGGAAACGCCGACCGATGCGCGCGTGCTACGAA
ACGGCGATTTGGAGCTCGATCTTCGTACCCAGCGTGTGCTCATCGACGGCTCCTGGCACGACCTTTCCCGCCGCGAAGTC
GATCTGCTCGAAACCCTCATGCGACACCCAGGGCAAATCCTCTCCCGAGTCCAACTCCTCCGACTGGTGTGGGACATGGA
TTGGGACCCCGGCTCAAACGTGGTGGACGTATATATCCGCGCGTTGAGGAAGAAAATCGGTGCCCATCGGGTCGAAACCA
TCCGAGGATCTGGCTACCGGCTGCGCTAA

Protein sequence : 
MSKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDGTDVLEQLRNLQVTLPIIVLT
ARTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKHTPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREV
DLLETLMRHPGQILSRVQLLRLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cgtR1 YP_008400418.1 two-component system, transcriptional response regulator BAC0197 Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cgtR1 YP_008400418.1 two-component system, transcriptional response regulator VFG1389 Protein 2e-34 42