Gene Information

Name : cgp_1832 (cgp_1832)
Accession : YP_008401718.1
Strain : Corynebacterium glutamicum MB001
Genome accession: NC_022040
Putative virulence/resistance : Virulence
Product : ABC-type putative iron-siderophore transporter, substrate-binding lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707564 - 1708640 bp
Length : 1077 bp
Strand : +
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGCTTCTTTCCGCCCGCACACACACGAGTTTCCAAGAACTTGGACTCAATGCTAGTCGGCGCAAAGCAATCAACTGGAC
ACTGGCACTCACTGTGGTGCTAATTGCCTCCATGTTTGTTGGCGTGCTCATCGGTGCATCCGGGACCTCAGTGTTTTCCA
CGTGGACCGTAATTAGCCACCATCTTTTTGGCACTGAGCTAGGTGGCTCCGACACTGCCGACGCCATCATTTGGTACATC
CGCACCCCACGCGTCTTGCTCGCTGCCATTGTGGGCGCAGGCCTTGCCCTGGCAGGTGCCATCATGCAAGTACTGGTCCG
AAACATGCTGGCAGACCCCTATATCCTCGGGGTGAACTCAGGTGCCAGTTGCGGTGCGGCCGCTGCCTTACTGTTCGGAG
TGGGCGCTGGATTTGGCGATTACGCCCTCCAAGGCAGCGCGTTTCTCGGCGCAATGGCAGCTTCCGGATTGATCTTCTTC
GTGGCGCGCGCAGCGGGGCGCATCTCCTCGACCCGCTTGTTGATGTCCGGCGTAGCGATCGGATACATGCTCTCTGCGGC
AACAAGCTTTCTCATCTTCTCCTCCGACTCCGCCGAAGGCAGCCGCTCCGTGTTGTTCTGGCTGCTTGGATCCTTAGGAC
TTGCCGCATGGAATGGGCCGATGGCGATCATCTTCCTCATCGTGGGCATTGCCCTGGCGTTGCTCATGGTGTTGGGTCCG
CAATTGGATGCCTTAAACTCCGGCGATGAAACCGCACTTACCTTGGGAGTATCCCCTGATCGCCTCCGCATTCTCCTCCT
GGTGATCACCTGCCTGCTGGTGGGATCCATGGTTGCCATGGCCGGCAGCATCGGATTCATCGGCCTTGTCATCCCCCACC
TGGCCAGGCGTTTTGTTAGTGGAAAACACCGACTCATGCTGCCTGTATCCGCGTTGATGGGCGCAATTTTGCTCATCTGG
GCTGATATCGCCGCCCGCACCCTGCTTGCGCCCCAAGAGATTCCCATCGGCATCATCACCGCACTCATCGGAGCACCCTT
CCTCCTGATTCTGGTTCGCCGGATGCACACCTACTGA

Protein sequence :
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISHHLFGTELGGSDTADAIIWYI
RTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNSGASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFF
VARAAGRISSTRLLMSGVAIGYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVSGKHRLMLPVSALMGAILLIW
ADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-23 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-23 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 5e-23 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cgp_1832 YP_008401718.1 ABC-type putative iron-siderophore transporter, substrate-binding lipoprotein VFG0922 Protein 1e-21 41