Gene Information

Name : tssB (BB2000_0820)
Accession : YP_008397377.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : TssB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 936610 - 938088 bp
Length : 1479 bp
Strand : -
Note : matching_protein_id: YP_002150514.1; similar to VipB; matching_locus_tag: PMI0748

DNA sequence :
ATGTCACTAAATGCAGAAGCTCAAGAGCAACAAGCCCCCGCATCTACAGGCTCTTTACTTGATGAAATTATGGCTCAATC
ACGTATGTCTCCAGAAACAGAAGCATACGATATTGCCAAACAAGGTGTTGCTGCTTTTATTAGTAATATTTTCGCCAGTG
AATCTGAAGACCAACAGATCAATCGATTATTAATCGATAAAATGCTTGTTGAACTTGATAATAAACTAAGTACTCAAGTT
GACGAAATTCTTCACGCGCCTAAATTTCAAGAAATTGAAGCTTCATGGCGTTCTTTAAAATTACTCGTTGATCGCACTGA
TTTTAGAGAAAATATTAAGATCAATATTCTTCATGCAACTAAAGAAGAGTTATTAGAAGATTTTGAATTTTCTCCAGAAA
TTGTTCAATCAGGCTTCTATCAACACGTCTACTCTTCAGGATACGGCCAATTTGGTGGTGAACCTGTTGCAACAGTTATT
GGTAACTACGCCTTTAACAATACTGCGCCAGATATGAAGTTAATGCAGTATGTTAGTACTGTTGGTGCAATGGCTCACGC
GCCATTCCTATCATCTGTTTCACCTAATTTCTTTGGTATTAATAGCTACGCTGAACTGCCGGCAATTAAAGATCTAAAAT
CTGTTTTTGAAGGCCCTGCACACACTAAATGGCGCTCACTGCGTGAAGCAGAAGATTCCCGTTATTTAGGGTTAACAGCA
CCGCGTTTCTTATTACGTTTGCCATACTCTCCAACAGAAAACCCTGTAAAAATGTTTAACTATTCAGAAAATGTTAAACA
AGACCATGAGCACTATTTATGGGGTAATACCGCATTCTTATTAGCAAGCTGTATTAATGATAGTTTTGCAAAATATCGTT
GGTGTCCAAACATTATTGGCCCACAAAGCGGCGGTACAGTTAATGATCTTCCTGTGCATATTTTTGAAGCGATGGGTGAA
TTACAAACTAAGATCCCAACTGAAGTTTTAGTTACCGATCGTAGAGAATTTGAACTAGCAGAGGAAGGCTTTATCACGCT
GACCATGCGTAAAGGCAGTGATAATGCTGCATTCTTCTCAGCAAACTCGGTTCAAAAACCAAAAGTCTTCCCAAATACTC
CTGAAGGCAAATTGGCAGAGACTAACTATAAGTTAGGAACTCAATTGCCATACATGTTTATTATCAATCGCTTAGCTCAT
TATATAAAAGTATTGCAACGTGAACAGATTGGCTCATGGAAAGAGCGTCAAGATCTGGAGCGTGAACTCAATATTTGGCT
TAAGCAATATGTCGCAGATCAAGAAAACCCACCAGCAGATGTTCGTAGTAAACGTCCATTGCGTTCAGCTGAAATCAAAG
TACTTGATGTTGATGGCGATCCAGGTTGGTACCAAGTCGCTATTCAAGTTCGCCCACATTTTAAATATATGGGTGCAAAC
TTTGAATTATCACTTGTTGGTCGTCTTGATAAAGAGTAA

Protein sequence :
MSLNAEAQEQQAPASTGSLLDEIMAQSRMSPETEAYDIAKQGVAAFISNIFASESEDQQINRLLIDKMLVELDNKLSTQV
DEILHAPKFQEIEASWRSLKLLVDRTDFRENIKINILHATKEELLEDFEFSPEIVQSGFYQHVYSSGYGQFGGEPVATVI
GNYAFNNTAPDMKLMQYVSTVGAMAHAPFLSSVSPNFFGINSYAELPAIKDLKSVFEGPAHTKWRSLREAEDSRYLGLTA
PRFLLRLPYSPTENPVKMFNYSENVKQDHEHYLWGNTAFLLASCINDSFAKYRWCPNIIGPQSGGTVNDLPVHIFEAMGE
LQTKIPTEVLVTDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTPEGKLAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNIWLKQYVADQENPPADVRSKRPLRSAEIKVLDVDGDPGWYQVAIQVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 73
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 73
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 4e-154 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tssB YP_008397377.1 TssB VFG2093 Protein 0.0 75
tssB YP_008397377.1 TssB VFG2475 Protein 1e-161 58
tssB YP_008397377.1 TssB VFG2070 Protein 8e-84 41