Gene Information

Name : mrpD (BB2000_0416)
Accession : YP_008396993.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 486787 - 487545 bp
Length : 759 bp
Strand : +
Note : matching_protein_id: YP_002150046.1; matching_locus_tag: PMI0266

DNA sequence :
ATGATGTTATTAAAACGCTCATGCATTGTTGCAACCACTTTGTTAATGGGAATGGCATTTACTCATCAAGCTGTTGCTGC
CATTGCGCTAGATCGAACTCGTGTCATTTTTAATGGTGCCGAAAAATCGATTAGTTTAAATGTCAGCAATCAAAATAAGG
ACTTGCCTTATCTTGCTCAAGGCTGGATGGAAAATGAAAACGGCGAACGTATTGAAAGCCCATTGATTGTTTTACCCCCG
ATCCAACGTATTGAACCGGGTGATAAAAGTCAGATTAAGGTGCAATCATTACCTGATATAGCCAAATTACCACAAGATAG
AGAAAGTGTTTTCTATTTTAACTTACGTGAAATTCCACCACGTAGTAATAAGCCTAATGTACTGCAAATTGCATTACAAA
CGCGGATCAAATTATTTTATCGTCCTGCATCAATCTATGCCTCGCAAACGGATTTAACCAATCCTTGGCAAGAGCAGATC
ACTTTAACTAAAAAAGGTGATCGCTTCGAAGTGAATAATCCAACGCCTTACTATGTGACATTAGTCGATGGATTAACCAG
TTTGAAAGGAAAAAGCTTGGATGGCTTTGAACCATTAATGATCGCACCTAAAAGTAGCGGCACGATAAATCTGAGTGCTT
CCATGTTTGGTGCTTCACCGGTATTGAGCTACATCAATGATTATGGCGGTCGCCCTCAGATGAAATTCACCTGTAGTGGC
AATCAATGCAAAGTAACAGAAACGGCAGCTGGAAACTAA

Protein sequence :
MMLLKRSCIVATTLLMGMAFTHQAVAAIALDRTRVIFNGAEKSISLNVSNQNKDLPYLAQGWMENENGERIESPLIVLPP
IQRIEPGDKSQIKVQSLPDIAKLPQDRESVFYFNLREIPPRSNKPNVLQIALQTRIKLFYRPASIYASQTDLTNPWQEQI
TLTKKGDRFEVNNPTPYYVTLVDGLTSLKGKSLDGFEPLMIAPKSSGTINLSASMFGASPVLSYINDYGGRPQMKFTCSG
NQCKVTETAAGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 9e-60 55
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 2e-59 55
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 1e-52 54
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 1e-59 51
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 8e-60 51
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 1e-59 51
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 1e-59 51
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 1e-59 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mrpD YP_008396993.1 fimbrial chaperone protein VFG1547 Protein 5e-60 55
mrpD YP_008396993.1 fimbrial chaperone protein VFG0885 Protein 6e-53 54
mrpD YP_008396993.1 fimbrial chaperone protein VFG0896 Protein 5e-60 51