Gene Information

Name : BB2000_3478 (BB2000_3478)
Accession : YP_008399957.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : fimbrial outer membrane usher protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3761347 - 3763968 bp
Length : 2622 bp
Strand : +
Note : matching_protein_id: YP_002153121.1; matching_locus_tag: PMI3437

DNA sequence :
ATGTCATTTTCAACAGGTATAAATAGCTTAAGCGGCATAAAAATAAATAACGTAAAATTATTTATTTTTATACTTGCGCT
ACTATTTTCAGTTGACTCAAGGTCTGAGGAAGAGTTTTATTATAACCCCTATTTCTTATCAGATAACCCGGAGTCTGTCG
CTGATCTATCTTCTTTTGAGAAAGGATTAGAAGTACCTGAAGGTAATTATCTGGTTGATATTTACTTAAATGACATATTC
TTAAAAACCCAATATATCAATTTTATTGAGAATAAAGGGCAGCTATCACCATGTATCACAAAAGCAGAGCTAAAAAGTTG
GAATGTTAATTTAAATCTCATAACGGATGAACAAAATAAAGATAAAAATAAAGTTGAACAGAAAAATGAGATCGATGAAC
ATTGTCAGTCACTTACTTCATTAATTGCTCAAGCCACAGCAAATTTTGATGTTGGTTCACAAAAGCTCAATCTCATTATA
CCTCAAGTATATTTAGTCAATCAGTCTCGAGGCTTTATTCCACCAGAGTTATGGGATGATGGTATTGTGGCTGGATTTAT
TACCTATATTTTAAATGGGAGTAAAACTCGCAACGATGGTAGCCCAGATACTCATTTTACTCATCTCAATTTACAAAGTG
GGATCAATCTTGGGCCATGGCGTCTTCGTGATAACTCTATTTACTCTTATGATTCTATTAATAAATCAAGTTGGAAACAT
CTGAATACTTATATAGAACGTGGTATTAATAAATTATATTCTCGTCTTATTATTGGTGATAGCTACACACAAAGTGAAGT
TTTCGACAGTATCAACTTTAGAGGCTTTCAACTGTCATCTGATGAAGTTATGTTACCGGATAGCCAAAGAGGTTTTGCTC
CGATTATTCGAGGTGTTGCCCGGACTAATGCCGAGGTTACTATACAGCAAAATGGTTATGTGATTTACCGTAACTCTTTT
CCACCGGGTCCTTTTGTTATTGATGATCTCTATTCAACAAGTAACAGTGGCGATTTAGAGGTAACCATTACCGAGTCTGA
TGGTTCAACACAAACCTTTACTGTGCCATATTCATCAGTCCCTTTATTACAAAGGGAAGGGCATACCAAATATTCAGTGA
CTGTAGGTAGTTACCGTTCGGGTAATGATGAGCAGGAGCGGCCTTATTTTTTACAAGGATCAGTGATCCACGGCTTACCT
GCGGGTTGGACCATTTATGGAGGAACCCAGTTATCCAAAAATTACCAAGCGGCAAGTATTGGGGTAGGTAAAAATATTGG
GCGTTTTGGGGCTTTATCATTTGATATTACCGAAGCGAGATCAATACTACCCGATGACTCTACACACCGTGGGCAATCGA
TACGTATTCTTTATAATAAATCTATCAATGAATTAGGCACAAGGGTGCAACTTGCCGGTTATAAATATGCGACGAGTGGT
TTTTATACTTTAGCAGAGACTACTTATAAAAAAATGAGAGGAAATTATATACAAACGGAGGATGGTGTTGTTGAAGTTAG
TGGATTGCCACAAAGTTACTACGATCTTATTTATAATAAAAGGCAAAGGATACAACTCAATATTACTCAAAAAATAGGTG
ATCAATCTACGTTATATATTATTGGTACTAATCAGCGTTATTGGAATTCTAAAAAACAAGATAATCAATTACAGATAGGC
CTTAATACTATTATTAAAGGTATTAATTTAGGCCTAAATTATAGCTTATCTAAAACATCATGGAATGATAGTAAAGATCA
GATGTTAGCATTTAATACTAGTATTCCTTTTAGTAACTTTATGCGTTCTGATAATGATTCTATATGGCAAAATGCGAGTT
TAAGTACTAACTCCTCGCATAACATGAAGAAACGTTTTAACAATACTATCGGATTAAACGGTACATTATTGGAAGATAAA
AACTTAAGTTACAATATTCAAACAGGTTATTCTCATGAAGAAGAATCGGACTCAACAGGATATGCCTCATTAAGTTATAA
CGGTTCTTATATGAATAGCAATATAGGTTATAACTATACCGATACATCACATCAAATAAATTATGGTATGAGTGGCAGTA
TTTTAGCTCACTCAGGTGGTATAACACTTAGTCAGCCTATATATCAAACAGCGGTGTTAGTTAAAGTACCTGAAGTTAAA
AATATAAAATTAGAAAACAATAGTGGCATCACGACAGATAGTAATGGTTATGCGGTTTTACCTTATGTTTCTGAATATAA
AGAAAACCGTATTGCATTGGATACCAATTCATTCTCTAACAATATTGAAATAGATAATGCGGTGAAAAGCGTAGTTCCTA
CTCGTGGGGCCATTAGTGCGATCACATTTGAGCCTAGTGTTGGGATAAAAGCAATTACGACATTAACCCATAAAGGGAAA
CCAGTACCTTTCGGGGCTATCGTTGATTCAGGTAATAATACTGGGATTGTGGCAGATGAAGGAAAAGTTTATTTAACAGG
GTTATCACCTTCAGGGCAATTAAAAGTGAATTGGGGTAGTAAGAAAGAGCAACAATGCTTAGTAAATTACACATTACCAC
CACAAGATCCAGATAAACTTTATGTTGAATATAGTGCAGAGTGCCACCCTATTAAGGAATAA

Protein sequence :
MSFSTGINSLSGIKINNVKLFIFILALLFSVDSRSEEEFYYNPYFLSDNPESVADLSSFEKGLEVPEGNYLVDIYLNDIF
LKTQYINFIENKGQLSPCITKAELKSWNVNLNLITDEQNKDKNKVEQKNEIDEHCQSLTSLIAQATANFDVGSQKLNLII
PQVYLVNQSRGFIPPELWDDGIVAGFITYILNGSKTRNDGSPDTHFTHLNLQSGINLGPWRLRDNSIYSYDSINKSSWKH
LNTYIERGINKLYSRLIIGDSYTQSEVFDSINFRGFQLSSDEVMLPDSQRGFAPIIRGVARTNAEVTIQQNGYVIYRNSF
PPGPFVIDDLYSTSNSGDLEVTITESDGSTQTFTVPYSSVPLLQREGHTKYSVTVGSYRSGNDEQERPYFLQGSVIHGLP
AGWTIYGGTQLSKNYQAASIGVGKNIGRFGALSFDITEARSILPDDSTHRGQSIRILYNKSINELGTRVQLAGYKYATSG
FYTLAETTYKKMRGNYIQTEDGVVEVSGLPQSYYDLIYNKRQRIQLNITQKIGDQSTLYIIGTNQRYWNSKKQDNQLQIG
LNTIIKGINLGLNYSLSKTSWNDSKDQMLAFNTSIPFSNFMRSDNDSIWQNASLSTNSSHNMKKRFNNTIGLNGTLLEDK
NLSYNIQTGYSHEEESDSTGYASLSYNGSYMNSNIGYNYTDTSHQINYGMSGSILAHSGGITLSQPIYQTAVLVKVPEVK
NIKLENNSGITTDSNGYAVLPYVSEYKENRIALDTNSFSNNIEIDNAVKSVVPTRGAISAITFEPSVGIKAITTLTHKGK
PVPFGAIVDSGNNTGIVADEGKVYLTGLSPSGQLKVNWGSKKEQQCLVNYTLPPQDPDKLYVEYSAECHPIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 51
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB2000_3478 YP_008399957.1 fimbrial outer membrane usher protein VFG0876 Protein 0.0 53
BB2000_3478 YP_008399957.1 fimbrial outer membrane usher protein VFG1645 Protein 0.0 46
BB2000_3478 YP_008399957.1 fimbrial outer membrane usher protein VFG0912 Protein 0.0 46
BB2000_3478 YP_008399957.1 fimbrial outer membrane usher protein VFG0446 Protein 7e-166 44