Gene Information

Name : BB2000_2692 (BB2000_2692)
Accession : YP_008399207.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : ATP synthase SpaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2933836 - 2935116 bp
Length : 1281 bp
Strand : -
Note : matching_protein_id: YP_002152393.1; matching_locus_tag: PMI2692

DNA sequence :

ATGTTTCATAACGCCGCGCATCCTTTACGAATACAAGGAAATATTTTAGAAGTGATGTTACGTGATGTTTTTATTGGGGA
GGTCTGCCAACTAAAAGAAAATATTTTCAGTGAAAATATTCTCGGTGAAGCTATTGTTATTGGGTTTCATAATAACATAG
CAATATTAAGTATGATGGGAAGCGCTCAAGGTTACTCTTTACAAATTATAGTTGAGCCAACAGGAAAAACATTCTCAGTT
GCCCTAGGCCCACATATATTAGGTAGTATGATTGATAGTAAAGGGAATTGCTTATTACGATTTAATACAGAAATAGCCGA
GAAGACTTTTAATACCTCATGTCCTATCGAAGGTCGGCCACCTTTGTTTAGTGATAGGCTGCCTATTACAACACTATTTA
AGTCAGGAATACGTGCTATTGATGGATTATTAAGTTGTGGATTGGGGCAACGAATGGGGATTTTTGCTAGTGCAGGAACG
GGTAAAACGATGTTAATGAATATGATTATCCGTTTTGCACAGGCCGATGTTTTTGTTATTGGCTTGATTGGTGAACGAGG
AAGAGAAGTTACAGAGTTTATTGAAGAATTAAAGCAACATAAGCGATGTGAAAATACGGTTTTAATTTGCTCAACTTCAG
AACAATCAGCGGTAGAAAGGTGTAATGCGGCTTTAGTAGCAACAACAGTTGCCGAATATTTTCGTCAACAAGGAAAAAAT
GCCGTTTTATTTATTGATTCTATGACTCGTTATTGTCGAGCGTTAAGGGATATCGCATTAACAGCGGGTGAGTTGCCCGT
ACGTAAAGGATATCCAGCATCTGTATTTGATAAACTTCCCGCTATTTTAGAGCGTCCAGGGGTGACAAAAACAGGCTCTA
TTACGGCATTTTATACTGTTTTATTAGAGAGTGATGATGAGCCTGATGCGATCGGTGAAGAAATTCGTTCTATTTTAGAT
GGACATATTTATTTATCTCGAAAAATAGCAGCATCAGGGCACTATCCTGCTATTGATGTATTAGGTAGTGTGAGTCGGGT
TTTTCAACAAGTCACTGATAGTAAACAACAAAAATCTGCTTTAAAAATAAGACAAATATTAATGCGATTACAAGATATTA
AGTTATTGCAAGAGTTAGGAGAATATCATGAAGGAGATAACGAATTAAATGATATCGCGGTAAGAAAACAAGCCAAGATA
GAAAGCTTTCTTACTCAATCCTTTAAAGAAAAAGCCGATTTTCAACAAACATTAGAACAAATGTATGAGATTACCGCTTA
A

Protein sequence :

MFHNAAHPLRIQGNILEVMLRDVFIGEVCQLKENIFSENILGEAIVIGFHNNIAILSMMGSAQGYSLQIIVEPTGKTFSV
ALGPHILGSMIDSKGNCLLRFNTEIAEKTFNTSCPIEGRPPLFSDRLPITTLFKSGIRAIDGLLSCGLGQRMGIFASAGT
GKTMLMNMIIRFAQADVFVIGLIGERGREVTEFIEELKQHKRCENTVLICSTSEQSAVERCNAALVATTVAEYFRQQGKN
AVLFIDSMTRYCRALRDIALTAGELPVRKGYPASVFDKLPAILERPGVTKTGSITAFYTVLLESDDEPDAIGEEIRSILD
GHIYLSRKIAASGHYPAIDVLGSVSRVFQQVTDSKQQKSALKIRQILMRLQDIKLLQELGEYHEGDNELNDIAVRKQAKI
ESFLTQSFKEKADFQQTLEQMYEITA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ysaN	AAS66842.1	YsaN	Not tested	SSR-1	Protein	7e-109	56
invC	AAS66861.1	InvC	Not tested	SSR-2	Protein	2e-104	52
invC	NP_461815.1	ATP synthase SpaL	Virulence	SPI-1	Protein	1e-105	52
invC	YP_217813.1	ATP synthase SpaL	Virulence	SPI-1	Protein	1e-105	52
spaI	NP_457288.1	secretory apparatus ATP synthase (associated with virulence)	Virulence	SPI-1	Protein	1e-105	52
spaI	NP_806497.1	ATP synthase SpaL	Virulence	SPI-1	Protein	1e-105	52
ECs3730	NP_311757.1	ATP synthase SpaL	Not tested	LIM	Protein	2e-99	52
unnamed	ACU09458.1	type III secretion apparatus H+-transporting two-sector ATPase	Virulence	LEE	Protein	2e-68	46
escN	CAI43874.1	EscN protein	Virulence	LEE	Protein	1e-68	46
escN	NP_290268.1	hypothetical protein	Virulence	LEE	Protein	2e-68	46
escN	AAK26715.1	EscN	Virulence	LEE	Protein	1e-68	46
ECs4568	NP_312595.1	EscN	Virulence	LEE	Protein	2e-68	46
escN	AAL57542.1	EscN	Virulence	LEE	Protein	1e-68	46
unnamed	AAL06369.1	EscN	Virulence	LEE	Protein	1e-67	46
escN	YP_003223475.1	translocator EscN	Virulence	LEE	Protein	1e-68	46
escN	CAC81862.1	EscN protein	Virulence	LEE II	Protein	7e-69	46
escN	YP_003236088.1	translocator EscN	Virulence	LEE	Protein	1e-68	46
escN	YP_003232153.1	T3SS structure protein EscN	Virulence	LEE	Protein	1e-68	46
escN	AAC38383.1	EscN	Virulence	LEE	Protein	3e-68	46
escN	AAC31513.1	L0034	Virulence	LEE	Protein	2e-68	46
escN	AFO66300.1	putative LEE-encoded type III secretion system ATPase	Virulence	SESS LEE	Protein	9e-68	46
escN	AFO66415.1	putative LEE-encoded type III secretion system ATPase	Virulence	SESS LEE	Protein	9e-68	46
lscN	AAO18044.1	LscN	Virulence	TTSS locus	Protein	5e-81	45
hrpB6	BAB07852.1	HrpB6	Virulence	Hrp PAI	Protein	1e-78	43
hrpB6	AAF61281.1	HrpB6	Virulence	Hrp PAI	Protein	1e-78	43
hrcN	YP_362163.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	6e-77	43
hrcN	YP_198730.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	2e-78	43
hrpB6	AAB08461.1	HrpB6	Virulence	Hrp PAI	Protein	4e-77	43
hrcN	NP_636610.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	2e-76	43
hrcN	NP_640767.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	5e-78	43
hrcN	AAP34339.1	HrcN	Virulence	Hrp PAI	Protein	2e-78	43
XC_3006	YP_244074.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	2e-76	43
ssaN	YP_216423.1	type III secretion system ATPase	Virulence	SPI-2	Protein	1e-66	43
ssaN	CAA70537.1	secretion system apparatus	Virulence	SPI-2	Protein	1e-66	42
ssaN	NP_456113.1	putative type III secretion ATP synthase	Virulence	SPI-2	Protein	3e-65	42
ssaN	NP_805086.1	type III secretion system ATPase	Virulence	SPI-2	Protein	3e-65	42
ssaN	NP_460380.1	type III secretion system ATPase	Virulence	SPI-2	Protein	2e-66	42
YPO0267	YP_002345348.1	type III secretion system ATPase	Virulence	Not named	Protein	3e-69	41
hrcN	ABA47275.1	HrcN	Virulence	S-PAI	Protein	6e-76	41
hrcN	AAB06001.1	HrcN	Virulence	Hrp PAI	Protein	9e-65	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG1778	Protein	3e-109	54
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0555	Protein	5e-106	52
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG2459	Protein	1e-106	50
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG1008	Protein	4e-97	50
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0192	Protein	1e-82	46
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0812	Protein	1e-68	46
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0730	Protein	2e-68	46
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0390	Protein	9e-80	45
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0048	Protein	7e-80	44
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG0515	Protein	8e-67	42
BB2000_2692	YP_008399207.1	ATP synthase SpaL	VFG2144	Protein	3e-69	42