Gene Information

Name : pmpA (BB2000_2356)
Accession : YP_008398881.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2550990 - 2551541 bp
Length : 552 bp
Strand : -
Note : matching_protein_id: YP_002151941.1; matching_locus_tag: PMI2223

DNA sequence : 
ATGAAATTGAATAAATTAGCGATGTTCGCTATTGCATCAATGGCTTTTTCTGCGACTGTTGCTCAAGCAGCTTCAGGTGA
TGGTACTATTACTTTCACTGGTAAAGTTATTGATGCACCTTGTGGTATTGCTACCGAAAGTGCTAACCAAGCTATCGATT
TTGGTCAAATCAGCAAAAGCCTATTAGAGAAAGATGGTATTTCTCAAGTTAAACAAATCCCAATTAAATTAGTTAATTGT
GATTTAACTAAAGCCGGTTCTGATACTGGTGCTGCTGGTTCTTATAAAGGCGTAAAAGTAACCTTTAATGGAAATACTAT
TACTGGTGCAACAGAAGAATTAGCAACAACTGGTAATACAGGGACTGCTATTGTTATTTCAGGAACGACAACTGGTTCAA
TGGTTAAATTCAATGAAGCAGGTGAATTACAAGCACTGGGTAATAATGATAATACGCTGATGTATACAGCTTGGGCTAAG
AAAGCAACAAACGGAACAATTGCTGAAGGTGAGTTTAACGCTACAACAAACTTCACATTAGCCTATGAATAA

Protein sequence : 
MKLNKLAMFAIASMAFSATVAQAASGDGTITFTGKVIDAPCGIATESANQAIDFGQISKSLLEKDGISQVKQIPIKLVNC
DLTKAGSDTGAAGSYKGVKVTFNGNTITGATEELATTGNTGTAIVISGTTTGSMVKFNEAGELQALGNNDNTLMYTAWAK
KATNGTIAEGEFNATTNFTLAYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 8e-35 52
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 2e-29 48
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 3e-29 48
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 8e-29 47
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 1e-28 47
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 2e-27 46
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 4e-25 43
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 1e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pmpA YP_008398881.1 fimbrial subunit VFG0893 Protein 4e-29 47
pmpA YP_008398881.1 fimbrial subunit VFG0882 Protein 1e-25 43
pmpA YP_008398881.1 fimbrial subunit VFG1550 Protein 5e-26 42