Gene Information

Name : BB2000_2350 (BB2000_2350)
Accession : YP_008398875.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2545396 - 2545941 bp
Length : 546 bp
Strand : -
Note : matching_protein_id: YP_002151935.1; matching_locus_tag: PMI2217

DNA sequence :
ATGAATAAAAGTAAATATTTTATACTGCCTATTTTTTTATATTTACTATCAGGAACTGCACGGGCAGTTGATATAAATAT
AGCTATTACAGGCGCTATTTATGTTCCACCTTGTGTTGTTAATAATAATATCCCTATACAGTTTTCTTTTAATCAAATAA
TGACTTATAAAGTCGATGGTCAAACAAGCGCTATCACAAAAAATATTCCTATTACATGTACTTATTTTAAGGGCTCACCT
TACGTCAAAGTATCTGGCATTCAGTTAGCTGGAGCGCCTGATAATGTGCTTAAAGTTTCCGCAGATAGCGTGAATTCAAA
TCGATTTGGCCTTGCCTTATATCAAGGAGAGAGTGTTGATGAGAATAATCCTTTGCGTTTGAATGGTTCAGCCCCTCGAG
GTTATGCCATTACAAAAGGTTTTTCTAATACAGGGCAAGACAGGAGCCAATTTACTATTACTGCTGTTCCTTTTAAAACA
GGTACTGCTGATTTATCTCCTGGAAATTTTACGGCCTCCGCATCATTAAGCATTGTTTATAACTAA

Protein sequence :
MNKSKYFILPIFLYLLSGTARAVDINIAITGAIYVPPCVVNNNIPIQFSFNQIMTYKVDGQTSAITKNIPITCTYFKGSP
YVKVSGIQLAGAPDNVLKVSADSVNSNRFGLALYQGESVDENNPLRLNGSAPRGYAITKGFSNTGQDRSQFTITAVPFKT
GTADLSPGNFTASASLSIVYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papF NP_755459.1 PapF protein Virulence PAI I CFT073 Protein 4e-27 41
papF_2 NP_757028.1 PapF protein Virulence PAI II CFT073 Protein 4e-27 41
papF YP_854249.1 P pilus minor tip component PapF Virulence PAI I APEC-O1 Protein 4e-27 41
papF YP_002414010.1 Fimbrial adapter PapF Not tested Not named Protein 4e-27 41
papF AAZ04419.1 P pilus minor tip component Virulence PAI I APEC-O1 Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BB2000_2350 YP_008398875.1 fimbrial subunit VFG0900 Protein 1e-27 41
BB2000_2350 YP_008398875.1 fimbrial subunit VFG0889 Protein 1e-27 41