Gene Information

Name : intB (BB2000_2024)
Accession : YP_008398551.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Unknown
Product : prophage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2177300 - 2178442 bp
Length : 1143 bp
Strand : +
Note : matching_protein_id: YP_002153152.1; matching_locus_tag: PMI3468

DNA sequence : 
TTGGTTAAATCCAATGGCAGCAAGCTGTGGTCATTTCGTTATATTCGCCCCCTCACCAAAAAGCGCGCTAAGAAAAGTCT
TGGCGCTTATCCTGCGGTCAGTCTTGCTGAGGCACGCAGTTACCGACTTGAAGCAAGAACATTGCTCGCGAAACAGATAG
ACCCACAAGATCACCAGAAAGAACAAATCCGTAACACGTTAGAAGCAAAGAAAAATACTTTTCAACTTGTTGCTGAACGT
TGGTGGGAAGTGAAGAAGTCCACCGTAACCGAAGATTACGGTAAAGATATCTGGCGCTCACTTGAACGTGACGTATTTCC
TGCTATTGGTGATATCAGTGTTATTGATATCAAAGCGCATATATTGGTTAAAGCAATACAACCCGTTCAAGCAAGAGGCG
CATTAGAAACTGCTCGTCGCCTATGTCAGCGAATCAATGAAGTGATGATCTATGCTCAAAATACTGGCTTAATTGATGCT
GTGCCAAGTATCAATATTGGTAAAGCGTTTGAAAAGCCCAAGAAAAATAATATGCCAAGTATCCCTCCAGATCAGCTACC
AAAACTCATGCAGACAATGCGTACAGCTAGTATTAGCCTATCTACTCGATGCTTGTTTATGTGGCAGCTGCTTACCATAT
CCCGCCCAGCCGAAGCCGCTGAAGCCCGTTGGGACGAAATCAACTTTGAAACCAAAGAATGGAAAATACCAGCAGCTAGA
ATGAAGATGAACCGTGAACACACTGTTCCATTATCTAACGCAACTTTAGCTATTTTAGAGTTAATGAAACCATTCAGTGG
CAATCGTGAGTTTATCTTTCCTAGCCGTATTAAACCCACCCAACCAATGAACAGCCAAACCGTCAATGCTGCATTAAAAC
GCGCTGGATTCGGCGGTGTATTGGTTTCTCATGGTCTGCGCTCAATTGCCAGTACTGCACTCAATGAGCAAGGTTTCCCT
CCTGATGTGATTGAAGCCGCTCTCGCTCACGTTGATAAGAACGAAGTTAGGCGTGCCTATAACCGCAGTGATTACTTAGA
ACAAAGACGCCCAATGATGCAATGGTGGGCTGACTTTATTGAAACGGCTGATAGGGGAAGTATTATTGAAGGTGGTATAA
GAGGGATATCGCTAGTTGGGTGA

Protein sequence : 
MVKSNGSKLWSFRYIRPLTKKRAKKSLGAYPAVSLAEARSYRLEARTLLAKQIDPQDHQKEQIRNTLEAKKNTFQLVAER
WWEVKKSTVTEDYGKDIWRSLERDVFPAIGDISVIDIKAHILVKAIQPVQARGALETARRLCQRINEVMIYAQNTGLIDA
VPSINIGKAFEKPKKNNMPSIPPDQLPKLMQTMRTASISLSTRCLFMWQLLTISRPAEAAEARWDEINFETKEWKIPAAR
MKMNREHTVPLSNATLAILELMKPFSGNREFIFPSRIKPTQPMNSQTVNAALKRAGFGGVLVSHGLRSIASTALNEQGFP
PDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFIETADRGSIIEGGIRGISLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-96 56
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-96 56
int AAK20773.1 integrase Not tested VPI Protein 1e-96 56
int AAK20803.1 integrase Not tested VPI Protein 1e-96 56
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-96 56
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-97 53
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 6e-81 50
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-81 50
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 6e-81 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
intB YP_008398551.1 prophage integrase VFG1092 Protein 3e-81 50