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Name : pmfC (BB2000_1994) Accession : YP_008398521.1 Strain : Proteus mirabilis BB2000 Genome accession: NC_022000 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 2151355 - 2153790 bp Length : 2436 bp Strand : + Note : matching_protein_id: YP_002151605.1; matching_locus_tag: PMI1878 DNA sequence : TTGCTATTAAGCTTGGCGTTTTTCTCACAAGCAGAGCAGGACGATTCTGTGGAATTTAACATTCATATGCTAGACGCGGA AGATCGCGATAATGTCGACCTTTCACGTTTTTCTACCTCAAATTATATCATTCCGGGTATGTACTATTTAGATATTCGTC TAAATGGTCGCGATTTTCCTCGCCAAAATATTAATTATATTGAAGTAGCAGATAATCATTCCGTGGCTTGTATCGACCCT ACTCTTTTAAAAAAGTTAACAATCAACCAAGAAAACCAAAAATATATCAAACAAATATCACCAGATTGTTTTGATATTAG CCAATTACCCGGTATCTCGATTAAAAATGATGGTGGTGTACTTGATATCACGTTACCGCGCTCATTAATGAAATATGAAG AATCTGATTGGACACCTCCGGAGCTTTGGGATAGCGGGGTCTCTGGGCTTATTTTTGATTATACATTAACAGGAACGTCA ACTCGCCCTAATAAAGGCAATAATAACAATACCTTAACTGGTTATGGTCAAGCGGGATTAAACTTGGGTGAATGGCGTTT ACGAGCTGAATATCAAGGCAATTATTCTTCTGAATATTCATCTAACAATCGTTTTGATTGGAACCAAATTTATGCCTATA AGCCATTACCAGATCTCGCAGCCAAACTAACGGTTGGGGAAACTTATTTAAACTCTCAAATTTTTGATAGTTTCCGTTTT ACAGGAGCCAATTTACAAAGCGATGAGAGAATGTTACCCCCATCTCTCCAAGGCTATGCACCTGAAATTCATGGCATCGC CAATACCAATGCAAAAGTGACGGTAACCCAAAATGGACGTTTAATTTATGAGACAACCGTACCTGCTGGCCCTTTCGTAA TTAACCATCTACAAAATACCGTACAGGGTCAACTCGATGTTAGAGTTGAAGAGCAAAATGGTAAGATTAACGAATTTCAA GTGCAAACCGCTAATTTGCCTTATATGACTCGCCCAGGATCTGTGCGTTTTAATACCTCACTGGGACAGTCATCCGTGAA CAACCATAAAATGCAAGGCCCTCTTTTCTATCAAGGGGATTTTTCATGGGGGATGAATAATACATGGTCTCTCTATGGTG GTGCTTTACTTACCGCTAAAGATTATAACGCATGGTCTTTAGGTATCGGCCATGATATGGGGCGTTTTGGTACCCTTTCT GGTGATATTACACAGTCTTATAGCAAAACTTATGATAATGAAAAAATCAATGGGATGTCTTTTAAACTAAACTATGCAAA AACTTTTGATGAGTACCACAGTACCATTACCTTTGCAGGTTATCGTTTCTCAGAAAAAACATTTCGCTCTTTTTCTCAGT ATATTGATGAGCGTTATAACGGCATCAATAATAATGGCTATGAAAAAGAAATGTACACCATTACCGGTAATAAAACTTTT TGGGCAGATGATGCAGAGAAATCGACCACCCTCTATCTCTCTTATCGCCACCAAAATTATTGGGATAAAAATACTCAAGA GCAGTATGGTGTCACAGTAAGTCGCAATTTTTCCATTATGGGGATTGAGCAAATCAATACCAACTTGTCAGCATTTCGTA CCCAATATAAAGGGAATACTGACGATACGCTCTCTTTTAATATTTCACTACCATTAGGAAGTGGTCGCAATATTGGTTAT AACTTGCAAGATAACAATGGCAAAGTGACACAAATGGCCTCTTATGCTGATAATCGTGATTATAATAATTTATGGCGCAT AAGAGCAGGCTTAAGTTCGGATAAGAAAGCCAATACCGATGGTTATTATCAACATCGTTCTCAGTATGCAGAAATCAATG CCAATGCAAGCTATCAACAAGATAATTACTTAGCAGTGGGCGCAACGATAAAAGGCGGTTTTACTGCTACTCGTTATGGC GCTGCATTACACAGTAGCAGTATGACCTCTAGCACCGCAAGAATAATGGTGGATACTGATGGTGTTGCAGGGGTGCCCTT TAATGGTCAAAGCACGACTACGAACCGCTTCGGCATTGGCGTACTAACCGACTTAACAAGTTATAACAATGTTGATGCAC GTATTGACGTCGATAAGATGGATCAAGATATTGAAACGCGTAAAGCCATTGCTTCAACAACCTTAACAGAAGGTGCCATT GGTTATTACCAATTTCCGGTTCGTCAAGGTGAACGCTTAATGGCTGTCTTACAGACAACTGATAATAAATACCCTCCTTT TGGTGCAGAAGTCACCAATCAAAAAGGGGAAAGTATTGGTATGGTGATGGAAGAAGGCCTTGTTTATATTGCGGGTGTTA ACCTTAATGAATCATTAAATGTAATTTGGAACGGTAAAACACAATGTTCAATTACCATTCCCGCGGAAATAACAGATCCC TTAAAACATCAATCGCTCGTTTGTCAGGATCGTTAA Protein sequence : MLLSLAFFSQAEQDDSVEFNIHMLDAEDRDNVDLSRFSTSNYIIPGMYYLDIRLNGRDFPRQNINYIEVADNHSVACIDP TLLKKLTINQENQKYIKQISPDCFDISQLPGISIKNDGGVLDITLPRSLMKYEESDWTPPELWDSGVSGLIFDYTLTGTS TRPNKGNNNNTLTGYGQAGLNLGEWRLRAEYQGNYSSEYSSNNRFDWNQIYAYKPLPDLAAKLTVGETYLNSQIFDSFRF TGANLQSDERMLPPSLQGYAPEIHGIANTNAKVTVTQNGRLIYETTVPAGPFVINHLQNTVQGQLDVRVEEQNGKINEFQ VQTANLPYMTRPGSVRFNTSLGQSSVNNHKMQGPLFYQGDFSWGMNNTWSLYGGALLTAKDYNAWSLGIGHDMGRFGTLS GDITQSYSKTYDNEKINGMSFKLNYAKTFDEYHSTITFAGYRFSEKTFRSFSQYIDERYNGINNNGYEKEMYTITGNKTF WADDAEKSTTLYLSYRHQNYWDKNTQEQYGVTVSRNFSIMGIEQINTNLSAFRTQYKGNTDDTLSFNISLPLGSGRNIGY NLQDNNGKVTQMASYADNRDYNNLWRIRAGLSSDKKANTDGYYQHRSQYAEINANASYQQDNYLAVGATIKGGFTATRYG AALHSSSMTSSTARIMVDTDGVAGVPFNGQSTTTNRFGIGVLTDLTSYNNVDARIDVDKMDQDIETRKAIASTTLTEGAI GYYQFPVRQGERLMAVLQTTDNKYPPFGAEVTNQKGESIGMVMEEGLVYIAGVNLNESLNVIWNGKTQCSITIPAEITDP LKHQSLVCQDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 5e-154 | 42 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 6e-153 | 42 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 5e-153 | 42 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-153 | 42 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 6e-154 | 42 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-153 | 42 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 4e-159 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pmfC | YP_008398521.1 | outer membrane usher protein | VFG1548 | Protein | 3e-154 | 42 |
| pmfC | YP_008398521.1 | outer membrane usher protein | VFG0884 | Protein | 5e-154 | 42 |
| pmfC | YP_008398521.1 | outer membrane usher protein | VFG0895 | Protein | 5e-154 | 42 |
