Gene Information

Name : fliI (BB2000_1726)
Accession : YP_008398270.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1870577 - 1871950 bp
Length : 1374 bp
Strand : +
Note : matching_protein_id: YP_002151364.1; matching_locus_tag: PMI1633

DNA sequence :
ATGACCGCAAGATTGGGGCGTTGGTTAGAAAAGCTCAATGAAGCAGAATCTCGTTTAAATAAAATTCCACGCATTCGCCA
ATATGGTCGCTTAACCCGTGCTACAGGCTTAGTCATGGAAGCCAAGGGGCTAGTTATGCCCCTTGGCTCAACCAGCTTAA
TAGAACGTACCATTGGTAAAACGGTTGAAGAAGTTGAAAGTGAAGTCGTCGGATTTAACGGTAGCCAAATGTTACTCATG
CCACTACAAGAAGTGGAAGGATTAACCCCAGGTGCTCGAGTCTACGCTCAATCGATCCCCGGTCGTGAAGGCGAAGGCCG
ACAATTGCCCCTTGGTGATGCCTTATTAGGCCGCGTACTTGATGGCTCAGGTGATCCCCTAGATGGTTTACCGCCGCCAG
ATACCAGTTATCGAGCACCACTGATTACACCACCTATCAACCCATTACAACGTACCCCCATTACAGATGTACTTGATGTG
GGTGTACGTGCCATCAATGCACTACTTACGGTCGGTCGTGGCCAACGTATGGGACTCTTTGCCGGCTCAGGTGTCGGGAA
AAGTGTTCTATTAGGTATGATGGCGCGTTTTACTCAAGCCGACGTCATTGTCGTGGGGCTTATTGGTGAGCGTGGTCGTG
AAGTTAAAGACTTTATTGAGAATATCCTAGGTAAAGAAGGATTAGCACGCTCGGTGGTAGTGGCAGCACCTGCTGATGTT
TCGCCACTCTTGCGAATGCAAGGTGCTTCTTATGCAACCCGTATTGCCGAAGATTTTCGTGATCGCGGTAAACATGTTTT
ATTAATTATGGATTCGTTAACTCGCTATAGCATGGCGCAACGTGAAATTGCCTTAGCCGTTGGTGAACCGCCAGCGACAA
AAGGTTATCCCCCTTCTGTATTTGCAAAATTACCCGCACTTGTTGAGCGTGCCGGTAATGGTGTTGATGGTGGTGGCTCC
ATTACTGCTTTCTATACCGTGTTAACAGAAGGTGACGATCAGCAAGATCCAATCGCTGATTCTGCCCGTGCTATTTTGGA
TGGCCATATCGTGCTTTCGCGTTCACTGGCGGAATCGGGTCACTACCCTGCTATTGATATTGAAGCGTCCATTAGCCGTG
CGATGACCTCACTGATTGATAAAACACATTATCGCCGAGTACAAGTATTTAAGCAGCTATTATCCAGTTATCAGCGCAAT
CGCGACTTAATTAATGTAGGGGCTTATGCCACAGGCAGTGATCCTATGCTGGATAAGGCGATTGCCCTTTATCCATCATT
AGCAAAATTCTTACAACAAGATATTCAAGAGCAATGTAGCTATCAACATGCTTGTGAACAACTTAATCAACTGATCACAC
TAGATTCATTCTGA

Protein sequence :
MTARLGRWLEKLNEAESRLNKIPRIRQYGRLTRATGLVMEAKGLVMPLGSTSLIERTIGKTVEEVESEVVGFNGSQMLLM
PLQEVEGLTPGARVYAQSIPGREGEGRQLPLGDALLGRVLDGSGDPLDGLPPPDTSYRAPLITPPINPLQRTPITDVLDV
GVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGKEGLARSVVVAAPADV
SPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGVDGGGS
ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLIDKTHYRRVQVFKQLLSSYQRN
RDLINVGAYATGSDPMLDKAIALYPSLAKFLQQDIQEQCSYQHACEQLNQLITLDSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-71 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-64 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-64 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-64 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-65 48
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-68 48
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-74 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-74 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-73 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-72 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-72 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-74 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-75 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-75 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-75 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-59 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-69 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-69 46
escN AAC31513.1 L0034 Virulence LEE Protein 3e-67 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-67 45
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-67 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-67 45
escN AAK26715.1 EscN Virulence LEE Protein 1e-67 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-67 45
escN AAL57542.1 EscN Virulence LEE Protein 1e-67 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-67 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-67 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-67 45
escN AAC38383.1 EscN Virulence LEE Protein 3e-67 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-67 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-67 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-59 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-61 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-61 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-62 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-51 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 8e-61 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 6e-61 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 9e-65 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-60 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_008398270.1 flagellum-specific ATP synthase VFG2331 Protein 8e-152 80
fliI YP_008398270.1 flagellum-specific ATP synthase VFG2499 Protein 5e-131 67
fliI YP_008398270.1 flagellum-specific ATP synthase VFG1254 Protein 4e-113 63
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0515 Protein 8e-65 49
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0192 Protein 5e-73 48
fliI YP_008398270.1 flagellum-specific ATP synthase VFG2144 Protein 5e-76 45
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0812 Protein 1e-67 45
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0730 Protein 2e-67 45
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0390 Protein 3e-69 44
fliI YP_008398270.1 flagellum-specific ATP synthase VFG0048 Protein 3e-68 42