|
Name : topB (BB2000_1529) Accession : YP_008398080.1 Strain : Proteus mirabilis BB2000 Genome accession: NC_022000 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1670389 - 1672356 bp Length : 1968 bp Strand : - Note : matching_protein_id: YP_002151227.1; matching_locus_tag: PMI1496 DNA sequence : ATGAGATTATTTATTGCAGAAAAACCCAGCCTTGCTCGAGCTATTGCTGATGTATTACCAAAACCGCATAAACGTGGTGA TGGTTTTATTGTTTGTGGTGATAACCAGTATGTGACGTGGTGTGTTGGTCATTTACTTGAGCAGGCTGAGCCGGATGCAT ATGATCCGCGCTATGCGCGTTGGTCGTTAGATGATTTGCCCATTATTCCGAATAAATGGCAACTCAAACCGCGCGCTGAT GTGAAAAAACAGCTAGATACGATCAACACATTACTAAAACAAGCCGATGAAGTGATCCACGCAGGAGACCCCGATCGCGA AGGGCAACTGTTGGTAGATGAAGTACTTAATTACCTTAATATTAGTGATGCTCAAAGAAAACAGGCACGCCGCTGCCTGA TTAACGATTTAAACCCCGCCGCGGTATCTCGAGCAATTGATAAGCTCCGCTACAATCATGAATTTATTCCATTATGTGTT TCTGCCTTAGCAAGAGCGAGGGCGGATTGGCTATATGGCATTAACATGACACGCGCTTACACGTTATTAGGACAGCGCAA TGGTTACCAAGGCGTACTTTCTGTTGGGCGAGTACAAACCCCGGTGCTGGGTTTAGTCGTACGCCGTGATGAAGAAATTG AAAACTTTGTACCGAAAGATTTTTTTGAAGTCAAAGCGCATATCGTTACTCCTGCAGATGAGCGATTTACCGCTATTTGG CAGCCGAGTGAACACTGCGAGCCTTGGCAAGATGAAGAAGGGCGTTTATTACATCGCAAATTAGCAGAGCATGTTGTTGA TAGAATAGCTGGCAAGCCTGCTAATGTTACCGATTATCAAGATAAACAAGAGTCTGAAATAGCACCTTTGCCTTTTTCAT TATCTGCTTTACAAATTGAAGCGGCGAAACGCTTTGGTTTAAGCGCTCAACAAGTGTTAGACACATGTCAACGCTTATAT GAAACGCATAAACTTATTACTTATCCACGCTCCGATAGTCGCTATCTGCCTGATGAACACTTTGCTGGGCGTCATGCGGT GATGAATGCCATTAGTGTGCATGATAATAGTCTTTTACCACAAGAAACATTAGATATTGATAAAAAGAACCGTTGCTGGG ATGACAAGAAAGTAGATGCGCACCATGCCATTATTCCTACTGCGAAAACAGGTAATATTTCATTAAGTGAAAATGAAAAG AATATTTACTATTTGATTGCCCGACAATATCTAATGCAATTTATGCCAGATGCGGTGTACCGCAAATGTGTGATTGAACT CGATATTGAGAATGGAAAGTTTATTGCTAAGGCACGATTTTTAGCACAAGCTGGCTGGCGTACCTTATTAGGTAGTAAAG AGCAAGATGCGGAAAATGATGGTAGCGCCTTACCTATTGTGGCTAAAGGTGATGAGTTACTTTGTGAAAAAGGCGAAATT GTTGCCAAGCAGACCCAACCACCAAGACCTTTTACAGATGCTACGCTACTTTCGGCTATGACCGGTATTGCACGTTTTGT GCAAGACAAAGAGCTAAAGAAAATCCTAAGAGCGACGGATGGGCTAGGTACTGAAGCGACTAGGGCTGGTATTATTGAAT TACTGTTTAAACGCGGCTTTCTGCAAAAGAAAGGGCGAGCTATCAACTCGACACCAGCAGGAAGAGCATTAATTCATGTT TTGCCAGATATGGCGACATTACCCGATATGACCGCTCATTGGGAATCAATATTAACGCAAATTAGTGAGAAGCAATTTAA GTATCAAGATTTTATGATGCCATTAAGTAACACACTATTTGAATTAATTACTCAAGCTAAACGTCGTCCTAATATTCAAG CGTTTAGAAACCTGCCTGCGCCTGCGCAGAATAAAAAACGTAAAGGTGCGACGAAAAAAAGTGCACAAGGGAAAAGTCGT TCAGCGCAGTCTCAATCTACGAATCGCAATATAAAGAGTGATGCTTAG Protein sequence : MRLFIAEKPSLARAIADVLPKPHKRGDGFIVCGDNQYVTWCVGHLLEQAEPDAYDPRYARWSLDDLPIIPNKWQLKPRAD VKKQLDTINTLLKQADEVIHAGDPDREGQLLVDEVLNYLNISDAQRKQARRCLINDLNPAAVSRAIDKLRYNHEFIPLCV SALARARADWLYGINMTRAYTLLGQRNGYQGVLSVGRVQTPVLGLVVRRDEEIENFVPKDFFEVKAHIVTPADERFTAIW QPSEHCEPWQDEEGRLLHRKLAEHVVDRIAGKPANVTDYQDKQESEIAPLPFSLSALQIEAAKRFGLSAQQVLDTCQRLY ETHKLITYPRSDSRYLPDEHFAGRHAVMNAISVHDNSLLPQETLDIDKKNRCWDDKKVDAHHAIIPTAKTGNISLSENEK NIYYLIARQYLMQFMPDAVYRKCVIELDIENGKFIAKARFLAQAGWRTLLGSKEQDAENDGSALPIVAKGDELLCEKGEI VAKQTQPPRPFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFKRGFLQKKGRAINSTPAGRALIHV LPDMATLPDMTAHWESILTQISEKQFKYQDFMMPLSNTLFELITQAKRRPNIQAFRNLPAPAQNKKRKGATKKSAQGKSR SAQSQSTNRNIKSDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-109 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-109 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-110 | 42 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-111 | 41 |
