Gene Information

Name : kdpE (BB2000_1235)
Accession : YP_008397789.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : two-component response regulator of kdp operon
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1369308 - 1369991 bp
Length : 684 bp
Strand : -
Note : matching_protein_id: YP_002150958.1; matching_locus_tag: PMI1226

DNA sequence :
GTGACGCCATATAACATATTGATTGTTGAAGATGAAAAAGAGATCTTACGATTCGTTCGCCTTGCATTAGAGAACGAAGG
TTTTCGTGTTTATGACGCCTCAGAATGTCAACGAGGATTAATAGAGGCAGCATCAAGAAAACCTGATTTAGTCATTCTTG
ATCTGGGATTACCTGATAAAGATGGGCTCTGCTTTATTCAAGATTTCCGTCAATGGAGTAGCACGCCGATTATTGTGTTA
TCCGCCAGAGATTCTGAACAAGATAAAGTTGATGCTTTAGACGCTGGAGCTGATGATTATTTAACTAAACCCTTCGGTAT
TAGTGAATTACTAGCCCGGGTTCGAGCTTCATTACGTCGCTTTGTCAAACAAGAAACAGAAACGACTCAATTTACATTTG
GTGATATCACTATTGATTGGGTTAAAAGAATAGTCACTCGCCAAGGCGTCCCCATTCACTTTACTCCGACCGAGTTTCGT
CTACTCAGTGAACTTGTCAACAATAGTGGAAAAGTATTAACTCAACGTCATTTAATGCAGCATGTTTGGGGGCCTAACTT
TGTAGAGCATAGCCATTATTTGCGAATTTATATGGGGCATTTACGCCAGAAAATAGAAACCGATCCCACCTGTCCAGTGC
ACTTAATTACTGAAACGGGGATCGGTTATCGTTTTATGCCTTAA

Protein sequence :
MTPYNILIVEDEKEILRFVRLALENEGFRVYDASECQRGLIEAASRKPDLVILDLGLPDKDGLCFIQDFRQWSSTPIIVL
SARDSEQDKVDALDAGADDYLTKPFGISELLARVRASLRRFVKQETETTQFTFGDITIDWVKRIVTRQGVPIHFTPTEFR
LLSELVNNSGKVLTQRHLMQHVWGPNFVEHSHYLRIYMGHLRQKIETDPTCPVHLITETGIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-35 43
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-35 43
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-35 43
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-35 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-35 43
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 3e-36 43
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-38 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_013450.8614146.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_002951.3238224.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_007793.3914065.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_002758.1121390.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_010079.5776364.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_002952.2859858.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_007622.3794948.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon NC_003923.1003417.p0 Protein 1e-28 43
kdpE YP_008397789.1 two-component response regulator of kdp operon AE015929.1.gene1106. Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_008397789.1 two-component response regulator of kdp operon VFG1390 Protein 4e-32 41