Gene Information

Name : sitC (BB2000_1062)
Accession : YP_008397617.1
Strain : Proteus mirabilis BB2000
Genome accession: NC_022000
Putative virulence/resistance : Virulence
Product : iron ABC transporter, membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1182271 - 1183182 bp
Length : 912 bp
Strand : -
Note : matching_protein_id: YP_002150775.1; matching_locus_tag: PMI1025

DNA sequence : 
ATGCTAGAATTACTCCTACAACCTTTTGAGTATAACTATATGGTAAAGGCTATCTGGGTAAGTGCCTTAGTTGGTGCTGT
CTGTGCCTTTTTATCTTCTTACCTTATTCTTAAAGGTTGGTCATTAATGGGAGATGCCCTCTCCCACTCCGTCGTTCCCG
GCGTTGCCGGTGCTTATATTTTAGGGCTGCCATACGCAGTGGGTGCTTTTTTTACGGGTCTACTTGCTGCTTTATCAATG
ACTTTTATTCGTCACATCACACGATTACGTGAAGATGCGGTGATCGGTTTTATTTTTTCTACTTTTTTTGCTTTTGGTCT
GTTGCTGGTTTCATTAAACCCTACTGCCGTCAACGTTCAGACCATTATTTTAGGGAATATTCTCGGCATTGCTGATGAAG
ATGTCTGGCAAGTCGTTATCATTACTGGTGTCTCTTTTCTTATTCTATTTTGTATGTGGAAAGATTTATTAGTTGTATTT
TTTGATGAAGTACATGCTCGCTCTATTGGTTTATCCCCTTTAAAACTAAAAATCATCTTCTTTACCTTGCTCAGTGCATG
TACCGTTGCTGCGCTACAAACGGTCGGCGCTATCTTAGTTATTGCTATGGTGGTTACTCCCGGCGCTACCGCTTATTTAC
TCACTGACCAATTTAAACGACTCGCTATTATCGCTATTTGTATTGGTACAGTAACCAGTGCTGTTGGTGCTTATCTAAGT
TATTTCTTTAATGGTGCTACGGGGGGCGTTATCGTCACAATGCAAACCGCCCTTTTCTTATTAGCCTTCTTATTTGCGCC
TAAACATGGCATGTTGGCAGCCCGTCGCCGCGCACGTCAAAGTTCACAAGCACTTATTTCACAATCCCAGCATCCAAAAG
ACGTTACTCAACAAGAAGAGGTGCAACTATGA

Protein sequence : 
MLELLLQPFEYNYMVKAIWVSALVGAVCAFLSSYLILKGWSLMGDALSHSVVPGVAGAYILGLPYAVGAFFTGLLAALSM
TFIRHITRLREDAVIGFIFSTFFAFGLLLVSLNPTAVNVQTIILGNILGIADEDVWQVVIITGVSFLILFCMWKDLLVVF
FDEVHARSIGLSPLKLKIIFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDQFKRLAIIAICIGTVTSAVGAYLS
YFFNGATGGVIVTMQTALFLLAFLFAPKHGMLAARRRARQSSQALISQSQHPKDVTQQEEVQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-75 66
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-75 66
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-75 66
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-75 66
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-75 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_008397617.1 iron ABC transporter, membrane protein BAC0441 Protein 9e-92 83
sitC YP_008397617.1 iron ABC transporter, membrane protein BAC0351 Protein 9e-76 66
sitC YP_008397617.1 iron ABC transporter, membrane protein BAC0442 Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitC YP_008397617.1 iron ABC transporter, membrane protein VFG0527 Protein 8e-76 66