Gene Information

Name : copB (EFAU085_01931)
Accession : YP_008395453.1
Strain : Enterococcus faecium AUS0085
Genome accession: NC_021994
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1944491 - 1946662 bp
Length : 2172 bp
Strand : -
Note : -

DNA sequence :
ATGAATGGGAACGATATGGAGAAAAAACATGAACATAAAAAAGAAGTAGTAAACAAAGAAAGTACAGAATCTCATGAAAA
ACAGATGGAGATGAAACATGACCATAGCCAGATGGACCATTCCATGCACATGGGACATAACCATGGAGATATAGCAAACA
GCAAACAAATGGACCATTCGATGCACATGGATCACGATCATGGCGGCATGGATCATTCCATGCACATGGGAAATTTCAAA
CAAAAATTTTGGCTATCGCTTATCCTAGCTATCCCAATCATTCTTTTTTCACCAATGATGGGAATGGAATTTCCATTTCA
AGTAACGTTTCCTGGTTCTGATTGGCTCGTATTGATCTTAGCAACTATACTATTTATCTATGGCGGTCAGCCATTTTTAA
GTGGAGCTAAGATGGAATTGAAACAAAAAAGTCCTGCTATGATGACACTGATCGCGATGGGGATTACAGTTGCATATATT
TATAGTGTCTATTCGTTTATCGCAAATCTGCTCAATCCACATACACACGTCATGGATTTCTTCTGGGAATTGGCTACTTT
GATCGTTATTATGCTACTAGGTCACTGGATTGAAATGAATGCTGTGTCGAATGCCAGCAATGCTTTACAAAAACTAGCAG
AATTACTGCCAGAATCAGTAAAACGCTTGACGAAAGATGGAAAAGAAGAGACAGTTTCATTGAAAGAAGTAAACGAAGGT
GATCGTTTGATCGTCCGGTCTGGTGATAAAATGCCAACAGATGGTGTAATCTTGAAAGGTGAAACAATTGTTGACGAATC
AGCTGTGACTGGCGAATCAAGAGGAATCAAAAAACAAGCCAATGACAAAGTGATTGGCGGTTCTATCAATGGGGATGGAA
CGATCGAAATCGAAGTAACTGGAACTGGTGAAAATGGTTATCTAGCGAAGGTTATGGAAATGGTGCGAAAAGCACAAGGA
GAAAAATCCAAGCTAGAGTCATTATCTGACAAAGTGGCAAAATGGCTGTTTTATGTCGCATTAATTGTGGGTATCCTGGC
ATTCATCGCCTGGTTGTTCTTGACAGATCTTCCTAATGCATTAGAACGTATGGTAACAGTCTTTATCATCGCCTGTCCTC
ATGCTCTAGGTTTAGCTATCCCATTAGTTGTTGCTCGCTCTACATCAATAGCAGCTAAAAACGGATTACTTTTGAAAAAC
CGCAATGCACTGGAGCAAGCCAATGATCTAGATGTGATCATGCTGGACAAAACAGGAACACTAACAGAAGGAAAATTTAC
TGTAACGGGTGTCGAAGTACTTGATGATGCGTTCAATAAAAATGAAATCCTTCAATATTTAGGAGCATTGGAAGCGAATG
CCAATCATCCATTGGCTGTTGGTATTATGAATTATTTGAAAGAACATGAAATCAAGCCTTATCAAGCCGAAAATCTAAAA
AATCTTTCAGGAGTTGGGCTAGAGGCAACAGTCAAAAACCAACAAGTGAAAATAGTTAATGAAAAAGAAGTTGAGCGTCT
CGGATTAAACGTAGAACAAGCATTATTGAAACCTTACCAAGAACAAGGAAATACCATCAGCTTCCTGATTTTAGAAAATC
ATCTAGCTGCAATCGTTGCTTTAGGTGACGTAGTAAAAACAGAAGCAAAAGAATTTATCCGAACATTGAAAGAAAGAAAA
ATCACTCCTGTCATGCTTACTGGTGACAATAAAAACGCTGCCCAAGCAGTAGCAGATTATTTAGGGATCGAAGAATATTA
TGGCGGTTTATTACCAGATGATAAAGAAGCTGTTGTCCAGAAATACCTTGACCAAGGGAAAAAAGTAATCATGGTGGGTG
ATGGGATCAATGATGCGCCAAGTTTAGCCCGTGCTTCAATCGGGATGGCAATCGGTGCAGGGACAGATATCGCAATCGAT
TCTGCGGATGTCGTATTGACAAACAGCGATCCAAAAGATATTTTGCATTTTCTTGATCTAGCCAAGCAAACGCGAAAGAA
AATGATCCAGAACCTCTGGTGGGGGGCAGGTTACAATATTCTTGCAATTCCGCTAGCAGCCGGAATTCTTGCGCCAATTG
GTATCATATTAAGTCCAGCAGTTGGTGCTGTCTTGATGTCGTTAAGTACGGTAGTTGTAGCTCTAAATGCTTTGACATTG
AAAATCAAATAA

Protein sequence :
MNGNDMEKKHEHKKEVVNKESTESHEKQMEMKHDHSQMDHSMHMGHNHGDIANSKQMDHSMHMDHDHGGMDHSMHMGNFK
QKFWLSLILAIPIILFSPMMGMEFPFQVTFPGSDWLVLILATILFIYGGQPFLSGAKMELKQKSPAMMTLIAMGITVAYI
YSVYSFIANLLNPHTHVMDFFWELATLIVIMLLGHWIEMNAVSNASNALQKLAELLPESVKRLTKDGKEETVSLKEVNEG
DRLIVRSGDKMPTDGVILKGETIVDESAVTGESRGIKKQANDKVIGGSINGDGTIEIEVTGTGENGYLAKVMEMVRKAQG
EKSKLESLSDKVAKWLFYVALIVGILAFIAWLFLTDLPNALERMVTVFIIACPHALGLAIPLVVARSTSIAAKNGLLLKN
RNALEQANDLDVIMLDKTGTLTEGKFTVTGVEVLDDAFNKNEILQYLGALEANANHPLAVGIMNYLKEHEIKPYQAENLK
NLSGVGLEATVKNQQVKIVNEKEVERLGLNVEQALLKPYQEQGNTISFLILENHLAAIVALGDVVKTEAKEFIRTLKERK
ITPVMLTGDNKNAAQAVADYLGIEEYYGGLLPDDKEAVVQKYLDQGKKVIMVGDGINDAPSLARASIGMAIGAGTDIAID
SADVVLTNSDPKDILHFLDLAKQTRKKMIQNLWWGAGYNILAIPLAAGILAPIGIILSPAVGAVLMSLSTVVVALNALTL
KIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-124 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copB YP_008395453.1 copper-translocating P-type ATPase BAC0079 Protein 0.0 86
copB YP_008395453.1 copper-translocating P-type ATPase BAC0383 Protein 5e-148 50
copB YP_008395453.1 copper-translocating P-type ATPase BAC0629 Protein 1e-126 44