Gene Information

Name : APA386B_872 (APA386B_872)
Accession : YP_008391696.1
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 904246 - 904923 bp
Length : 678 bp
Strand : +
Note : Signal transduction response regulator, receiver domain, heavy metal response regulator

DNA sequence : 
ATGCGCGTTCTTCTTGTTGAAGACGATCAAACAGTTCGCAATTTTGTTGCCAAAGGCCTTGCAGAAGCTGGGCATTTGGT
TGAGCAGGCTGAAGACGGCAAAAATGGCCTCTCCCTTGCTACCAGCGAAAAGTTTGACGTCATCATTTTAGATCGCATGC
TGCCGGGCGGTGTAGAAGGCCTTCATATCCTGCAAACATTGCGAAATCAAAACAATACAACCCCCGTGTTGCTGCTTTCC
GCCTTGGCCGATGTGGATGAAAAAGTGGCCGGACTGAAAGCAGGTGGGGATGATTACGTTACAAAGCCCTTCTCATTTTC
CGAACTTCAGGCACGTTTGGAAGCACTAGTCCGGCGCAACAGAAACGAAGCCCAGCCCCAGACGCGCCTTACAATTGGGG
ATCTGGAAATAGATCTGCTATCGCGCAATGTAAAACGCGCTGGCCAGAAGATTGAGTTGCAACCGCGTGAATTCCGCCTG
TTGGAATTTTTGATGCGCCATGCCGGTCAGGTTGTTACCCGCACCATGCTGCTGGAAGGTGTATGGGATTATCATTTTGA
CCCCCAGACAAACGTCATTGACGTGCATATTTCCCGCCTGCGCCAGAAAATAGACAGACCTTTCCATCATCCACTGGTGC
ATACCATCCGTAATGCAGGATATATGCTGCAGGAATAG

Protein sequence : 
MRVLLVEDDQTVRNFVAKGLAEAGHLVEQAEDGKNGLSLATSEKFDVIILDRMLPGGVEGLHILQTLRNQNNTTPVLLLS
ALADVDEKVAGLKAGGDDYVTKPFSFSELQARLEALVRRNRNEAQPQTRLTIGDLEIDLLSRNVKRAGQKIELQPREFRL
LEFLMRHAGQVVTRTMLLEGVWDYHFDPQTNVIDVHISRLRQKIDRPFHHPLVHTIRNAGYMLQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-44 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-43 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA386B_872 YP_008391696.1 two-component response regulator BAC0125 Protein 2e-49 46
APA386B_872 YP_008391696.1 two-component response regulator BAC0111 Protein 9e-53 46
APA386B_872 YP_008391696.1 two-component response regulator BAC0197 Protein 5e-46 46
APA386B_872 YP_008391696.1 two-component response regulator BAC0083 Protein 1e-47 45
APA386B_872 YP_008391696.1 two-component response regulator BAC0347 Protein 3e-49 45
APA386B_872 YP_008391696.1 two-component response regulator BAC0638 Protein 2e-42 45
APA386B_872 YP_008391696.1 two-component response regulator BAC0308 Protein 1e-47 44
APA386B_872 YP_008391696.1 two-component response regulator AE016830.1.gene1681. Protein 4e-40 41
APA386B_872 YP_008391696.1 two-component response regulator CP001918.1.gene5135. Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA386B_872 YP_008391696.1 two-component response regulator VFG0596 Protein 5e-45 45
APA386B_872 YP_008391696.1 two-component response regulator VFG1389 Protein 4e-35 41