Gene Information

Name : lolD (APA386B_550)
Accession : YP_008391384.1
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Resistance
Product : K09810 lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 555207 - 555929 bp
Length : 723 bp
Strand : -
Note : ABC transporter-like, ABC transporter, LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein

DNA sequence :
ATGAATAATCAGCCAGTTTTAAGCCTGAAGCATGTTCGCAAGGCTTACCGTAGTGGGGATGAAGGTGTTCTGCCGGTTTT
GCAGGATATCAATTTCTCGCTGCATACCGGAGAAATTGTAGGTCTGGTTGCGCCATCTGGCACGGGTAAATCAACCTTGC
TGCATCTGGCTGGCTTGCTGGATACGCCAGACGCGGGCGAGATTGTTATTGCGGGCCAGATTACCACTGGCATGGCAGAT
GCCGGACGCACAGCGATGCGGCGAGACCAGATAGGATTTGTCTATCAGTTTCACCACCTTCTGGGTGAATTTACAGCCAA
GGAAAACGTGGTGCTCCCGCAGATGATTGCGGGCGCAGGCAAGGCACAGGCGCGCCGTAAAGCCGAGGAGCTTTTACGCA
TGTTTGGCTTGGCACACCGTGTAAACCATTTGCCGGGCAAGCTTTCGGGCGGTGAGCAGCAGCGTGTTGCCATTGCACGT
GCCCTAGCAAATGATCCGGCTCTTTTGCTGGCTGATGAACCTACCGGCAACTTGGATGTGCATACGGCAGATAGCGTATT
TTCTCAGTTGCTTGATGTTGTGCGCCAGAAAGGGCTAGCGGTTTTGGTGGCAACCCATAACCGCGAATTGCTGCCCAGGA
TGGATAGGGTTGTGACCATGCAGGAAGGCAGGCTGGTTCCTGCCGATTTTAACGGCGATCCACTGCCTGCCTCTGCTGGT
TAA

Protein sequence :
MNNQPVLSLKHVRKAYRSGDEGVLPVLQDINFSLHTGEIVGLVAPSGTGKSTLLHLAGLLDTPDAGEIVIAGQITTGMAD
AGRTAMRRDQIGFVYQFHHLLGEFTAKENVVLPQMIAGAGKAQARRKAEELLRMFGLAHRVNHLPGKLSGGEQQRVAIAR
ALANDPALLLADEPTGNLDVHTADSVFSQLLDVVRQKGLAVLVATHNRELLPRMDRVVTMQEGRLVPADFNGDPLPASAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_008391384.1 K09810 lipoprotein-releasing system ATP-binding protein NC_012469.1.7685735. Protein 2e-33 45
lolD YP_008391384.1 K09810 lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 4e-27 42
lolD YP_008391384.1 K09810 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 2e-29 42