Gene Information

Name : APA386B_487 (APA386B_487)
Accession : YP_008391322.1
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 472446 - 474056 bp
Length : 1611 bp
Strand : +
Note : Transposase, IS66, Transposase IS66 family

DNA sequence :
ATGACGCATGCGCCCGCGGTCCTGCCTGATGATCCAGATATCCTGAGGGAAATGATTGTTTCCCTTCAGACTGAAGTGGC
TCGGCTTTCCGCTTCAGCCCGTGCGTATGAAGCTCTTGTCCAGTCTCTCAAAATCCGGATCGCGCGTCTTCAGAAACAGA
AATTCGGGGCCAGTTCAGAAAAGATAGACCGTGAGATTGAACAGCTCGAACTGCTTCTTGAAGATGTGAAAATCGCCATC
GCGGCAGCCGATCCTTCTCCTGACATCAGGGAGCACGATGACAGCGATGGTGTGGTCTCTTCCCCCAGACGGCGCGGCAA
ACCAAAGGTTTCCGACACGACACCACGGGAGCGTATTGTTCTCGACCCGGGCGAGGCCTGTCCCACCTGTGGCGGTCGCC
TACGCCTCGTTGGCGAAGATGTCACCGAAATACTGGACTTTATTGCGGCAAAACTGAAAGTTGTCGAAACGGCACGGCTG
AAGAAATCCTGCCGTCATTGCGAAACAATGGTACAGCCTGAAGCACCGTCGCGCCCTGTCCCACGGGGCATGGCTGGCCC
CGGGCTGCTGGCCCATATCCTGGTCTCAAAATTCGATGATCACATTCCGCTTTATCGTCAGAATGAGATCTTTTCCCGTC
AGGGTGTGGACATTCCCCGTTCAACCCTGATCGACTGGTGTGGTCAGGCCGTTGCCGTTCTGCGTCCTCTCACAGATCTG
ATCCGTCAGGATGTCGTTGGGGCAGACCTGCTGCATGCCGATGATACACCCATCCAGGTTCTTGATTCCCGTCTGCGCCA
GGCTGGTAAACCACGTGGTGTGAAGGAAGGGCGGATCTGGACCTATCTGCGCGATCCCCGCCCCTGGGGCGGGAGTGATC
CGCCCGCCGTGGCCTACTGGTTCTCTCCCGATCGCAAGGGGATCAATCCCCAGACCCATCTGGCACAGTTCTGGGGCATT
CTGCAGGCTGACGCCTACGCCGGGTTCAGGGATCTGTATAAACCAGACGCAACAGGAACCGTGCACGTGCGCGAAGCGGC
CTGCTGGGCTCATCTCCGCCGGGCCTTCCATGATGTCTGGAAGGGCAGTGATTCGACAATCGCAAGGGAAGCACTTGAAC
AGATCGGAGAGCTCTACGATATCGAGCGCCAGATCACCGGACACCCGGCCCCGTATCGTCTGGCTGTCCGACAGGAACAA
AGCCGCCCCCGTGTCACAGCATTCCACGCATGGTGCGAAACACAGCTCGCCCGTATCCCTGGAAAGGGGGAACTGGCAAA
AGCGATCCGTTATGCGCTCAACCGGTGGAAGGCCTTTACCCTGTTCCTCGAAGATGGTCGTGTCGCCATCGACAACAATC
CTGCCGAACGCGCCATACGGCCCGTATGCGTGGGGCGAAAAAATTATCTCTTTGCCGGATCCGACACCGGGGGCGACAAC
ATCGCTGATGCCATGACGCTTATCGAAAGCGCAAAACTCTCCCGGCTTAATCCGCACGATTACCTCGCCGACGTCCTGGC
CCGTATCAACGAGCACAAGATCAATCGGCTCCACGAACTATTGCCATGGAACTGGAAACCCGTGAATACACTGCACAGGC
AGGCCGCATAA

Protein sequence :
MTHAPAVLPDDPDILREMIVSLQTEVARLSASARAYEALVQSLKIRIARLQKQKFGASSEKIDREIEQLELLLEDVKIAI
AAADPSPDIREHDDSDGVVSSPRRRGKPKVSDTTPRERIVLDPGEACPTCGGRLRLVGEDVTEILDFIAAKLKVVETARL
KKSCRHCETMVQPEAPSRPVPRGMAGPGLLAHILVSKFDDHIPLYRQNEIFSRQGVDIPRSTLIDWCGQAVAVLRPLTDL
IRQDVVGADLLHADDTPIQVLDSRLRQAGKPRGVKEGRIWTYLRDPRPWGGSDPPAVAYWFSPDRKGINPQTHLAQFWGI
LQADAYAGFRDLYKPDATGTVHVREAACWAHLRRAFHDVWKGSDSTIAREALEQIGELYDIERQITGHPAPYRLAVRQEQ
SRPRVTAFHAWCETQLARIPGKGELAKAIRYALNRWKAFTLFLEDGRVAIDNNPAERAIRPVCVGRKNYLFAGSDTGGDN
IADAMTLIESAKLSRLNPHDYLADVLARINEHKINRLHELLPWNWKPVNTLHRQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-90 45
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 9e-91 43
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-98 43
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-93 43
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-94 43
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 6e-93 42
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 6e-93 42
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 8e-94 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-93 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 8e-94 42
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-93 42
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-94 42
tnp AEA34686.1 transposase Not tested Not named Protein 4e-94 42
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-94 42
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-90 42
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-90 42
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-82 41
unnamed AAL08460.1 unknown Not tested SRL Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA386B_487 YP_008391322.1 transposase VFG1736 Protein 1e-78 43
APA386B_487 YP_008391322.1 transposase VFG0793 Protein 4e-94 42
APA386B_487 YP_008391322.1 transposase VFG1051 Protein 2e-69 41