Gene Information

Name : ragA (APA386B_2423)
Accession : YP_008393181.1
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2484782 - 2485513 bp
Length : 732 bp
Strand : +
Note : Signal transduction response regulator, receiver domain

DNA sequence : 
ATGAATGGAACAGCGGATATGTCTAAGGAAGATACCGATTTTTTCTCACCCAATGGGAAAACGGTGCTTCTGGTAGAAGA
TGACGGCACCATAGCCGAAGAAATTGCAGCTGAACTGACAGCCCGCGGTTTTAAGGTGCTGCACGAAGCCACGGGTAATG
CCGGGCTGGAAGCCGCCTTGCGGCTAGAAGCAGACATAATGGTGGTGGACCGCCTTTTGCCCGGTCTGGATGGTTTGAGC
GTTATAGAAACCATGCGGCAGCAGGGCATACGCATGCCTGTTCTGGTGCTTTCTGCCCTTTCTGCGGTGGATGATAGGGT
AACCGGCCTTAAGGCTGGGGGAGATGATTACCTCACCAAACCCTTCGCCATAGAAGAACTGGTGGCCCGTATAGAAGCCC
TGTTGCGCAGGCCGGATGATACCCGCAGCACCAAGCTGCATCTGGGCCCGATTGATATGGACCTGATAGAACGCCGCGTC
TGGCGGGATGGGCGGGAAATCGAGTTGCTACCGCGTGAATTCCGTTTGCTTGAATACCTTATGCGCAGGCCGGGGCAGGT
GCTCACACGGTCCATGTTGCTGGAAGATGTGTGGCAGTATCGGTTTATTCCGCGCACCAATCTGGTGGATGTTCATATCG
GCAAGCTGCGGCGGAAAATTGATGGGCCGGGAGAAGAACCGTTGATCGAGAGTATTCGCGGAACGGGATTCCGGCTGCGT
GTTCCTGACTGA

Protein sequence : 
MNGTADMSKEDTDFFSPNGKTVLLVEDDGTIAEEIAAELTARGFKVLHEATGNAGLEAALRLEADIMVVDRLLPGLDGLS
VIETMRQQGIRMPVLVLSALSAVDDRVTGLKAGGDDYLTKPFAIEELVARIEALLRRPDDTRSTKLHLGPIDMDLIERRV
WRDGREIELLPREFRLLEYLMRRPGQVLTRSMLLEDVWQYRFIPRTNLVDVHIGKLRRKIDGPGEEPLIESIRGTGFRLR
VPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_008393181.1 two component transcriptional regulator BAC0125 Protein 3e-37 44
ragA YP_008393181.1 two component transcriptional regulator BAC0083 Protein 3e-38 43
ragA YP_008393181.1 two component transcriptional regulator BAC0638 Protein 2e-31 43
ragA YP_008393181.1 two component transcriptional regulator HE999704.1.gene1528. Protein 1e-25 42
ragA YP_008393181.1 two component transcriptional regulator BAC0347 Protein 8e-37 41
ragA YP_008393181.1 two component transcriptional regulator BAC0197 Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_008393181.1 two component transcriptional regulator VFG1389 Protein 5e-38 46
ragA YP_008393181.1 two component transcriptional regulator VFG1390 Protein 7e-36 42
ragA YP_008393181.1 two component transcriptional regulator VFG0596 Protein 2e-32 41
ragA YP_008393181.1 two component transcriptional regulator VFG0473 Protein 3e-28 41