Gene Information

Name : xerD (APA386B_2294)
Accession : YP_008393054.2
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2364042 - 2364929 bp
Length : 888 bp
Strand : +
Note : Integrase, catalytic core, phage, Phage integrase family, tyrosine recombinase XerD

DNA sequence :
ATGCTGGCTGCCGAGCGTGCAGCCGCCCCCAATACGCTGGCAGCGTATGAAGCAGACTTGACCTCCTGCGCTGAAAGTCT
GGCGCGGGAGGGGCAAACCCTGCAAACGGCCACAACCGAGGGTTTGCAAAACTGGATGGCTGCCTTGGTAGGCAGCGGGC
AGGCGCGGCGCACGGTGGCGCGGCGCTTGTCCTGCATCCGGCAGTTTTACCTGTTTCTGCTACGTGAAGGGATGCGTGCT
GATAACCCGGCAGCGCATCTGGATAGCCCCAAACCCCACACACCCTTGCCGCGTTTTTTATCCGAATCGGAAGTGCTTGC
GCTGCTGAATGCCTGTGCAGAACCTGCTGGGGCATCCTTGGCTAAAAAACGGCGCGGCATTTTGGCCAAGGCAGCGCTGG
AACTGCTGTATGCCTCTGGCCTGCGTATTTCCGAATTATTGGCGCTCCCACGCAAAGCCATAGCCGGTGACCAACGCATG
ATTATGGTGCGTGGCAAAGGCGGGCGGGAACGTTTAGTGCCACTTTCAGACAGTGCGCGGGAAGCCGCGCAGGCTTTGCT
GGAAGTGGACGCGCATTTGGAAAGTCCATTCCTTTTTCCCGGCCGCGACCCAGCAAAACCCATGACACGGCAGGCGTTTG
ACCGGATTCTGCACACAGTGGCCATACGGGCGGAAATTGATCCGGCGCGTCTTTCCCCCCACGTGCTGCGCCATTCCTTT
GCTACGCATTTGCTGGCGCATGGGGCAGATTTGCGGGCCTTGCAGATGTTGCTGGGGCATGCAGACATCGCCACCACCCA
GATTTACACTCATGTGCAGACAGAACGCCTGCAAAAGGCCGTGCAGGCGCATCACCCTCTGGCGGCGGATTCTGCCCACA
CCAAGTGA

Protein sequence :
MLSGGVDLFLEMLAAERAAAPNTLAAYEADLTSCAESLAREGQTLQTATTEGLQNWMAALVGSGQARRTVARRLSCIRQF
YLFLLREGMRADNPAAHLDSPKPHTPLPRFLSESEVLALLNACAEPAGASLAKKRRGILAKAALELLYASGLRISELLAL
PRKAIAGDQRMIMVRGKGGRERLVPLSDSAREAAQALLEVDAHLESPFLFPGRDPAKPMTRQAFDRILHTVAIRAEIDPA
RLSPHVLRHSFATHLLAHGADLRALQMLLGHADIATTQIYTHVQTERLQKAVQAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-38 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-38 41