Gene Information

Name : B446_03440 (B446_03440)
Accession : YP_008384331.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Unknown
Product : ECF subfamily RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 860465 - 861088 bp
Length : 624 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :
GTGATCACTCCTGCCCTGCCCGCCCCGCGCGAGGACCGCGCCCCCGCCGCCCGGCCGGCGCCGACCGACGAGTCGGTCAC
CGCGTGGGCCCTGGCCGCCCGCGGCGGCGACCCCGACGCGGTGGAGCGCTTCGTGCGCGCGCTGCACCGCGACGTCCGGC
GCTACGTCGCCCACCTGTGCGCCGACCCCCAGGCCGTCGACGACCTCGCGCAGGACACGTTCCTGCGGGCGCTCGGCAGC
CTGCACCGCTTCGAGGGCCGCTCCTCGGCACGCGTCTGGCTGCTGTCCATCGCGCGCCGCGCCGTCCTCGACAGCTACCG
GCACGCGGCCGCCCGGCCCCGGCTCAGTGATGCGCCCGACTGGCAGGCGGCCGTGGAGCGGGCCCAGACCCGGGGCCTGC
CCGGCTTCGACGAGGGCGTCGTCCTGCTCGACCTGCTGGCCGCGCTGCCCGGGGAGCGCCGCGAGGCGTTCGTGCTGACG
CAGCTCGCCGGGCTGCCGTACGCGGCGGCGGCCGCGGCGAGCGGCTGCCCGGTGGGCACGGTCCGCTCACGGGTGGCCCG
GGCCCGCGCCACCCTGGTCGATCTGCTGCGCGAAGCGGACCGGCCGGCCGCCGCGGCGGCCTGA

Protein sequence :
MITPALPAPREDRAPAARPAPTDESVTAWALAARGGDPDAVERFVRALHRDVRRYVAHLCADPQAVDDLAQDTFLRALGS
LHRFEGRSSARVWLLSIARRAVLDSYRHAAARPRLSDAPDWQAAVERAQTRGLPGFDEGVVLLDLLAALPGERREAFVLT
QLAGLPYAAAAAASGCPVGTVRSRVARARATLVDLLREADRPAAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigC YP_005126716.1 ECF-family sigma factor C Not tested Not named Protein 2e-20 46