|
Name : B446_31975 (B446_31975) Accession : YP_008390010.1 Strain : Streptomyces collinus Tu 365 Genome accession: NC_021985 Putative virulence/resistance : Virulence Product : DNA binding ATP-dependent peptidase Function : - COG functional category : - COG ID : - EC number : - Position : 7402862 - 7405342 bp Length : 2481 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAGCACACCCGGCTTCGGATTCGGCCGCAGCCCCTTCGAGGAGTTCGACGAGCTGATGTCCCGGTTCTTCGGGCCGGG CGGGCAGACGGCGCCGGCCGCCCGCAGGCCCCAGCGCGTCGACATCGGCAGTCTGCTCTCCGAGCGGGCCATGGAGCTGG TGGCGGAGGCCAGGGACATCGCGGGCGCCGAGGGCAGCGAGGAGCTGGACGCCCGCCACCTGCTGGCCGCGGCGACCCGC AACGAGTCCACGCGGCGCCTGCTCACCGAGTCCGGCACCGACCCGGACCGGCTCCGCGAGCAGCTCGGCACCACGGGGAA CGGCGGCGAGCGGACCGAACCCACGACGCTCACCCCGTCGGCCAAGCGCGCCCTCCTCGACGCCTACCGTGTCTCCCGGG CCGAGGACGCCTCCTACATCGGCCCCGGCCATCTGCTGCGGGCCCTCGCCGCCAACCCGGAGTCGGCCGCCGGGCAGGCG CTCGGCGACGGCGGCTGGGAGCCCACCCGGCTGCCCACCGAGGGCCAGGCCGAGCGGAAGAAGCCCAGCAGCACCCCGAC CGTCGACGAGTACGGCCGCGATCTCACCCAGGACGCCCGCGACGGCCGCCTCGACCCGGTGATCGGGCGCGACGACGAGG TCGAGCAGACCATCGAGGTGCTCTCCCGGCGCAGCAAGAACAACCCCGTCCTGATCGGCGACCCCGGAGTCGGCAAGACC GCCGTGGTCGAGGGCATCGCCCAGCGCATCGTCGCCGGCGACGTGCCCAGGACGCTCGCCGGCAAGCGGCTCGTCTCCCT GGACCTGGCCGGCATGGTGGCCGGCACCAAGTACCGGGGCGAGTTCGAGGAACGGCTGAAGAAGCTGCTGGACGAGGTCG GTGAGCACGGCGACGAACTCATCCTGTTCCTCGACGAGTTGCACACCGTGGTCGGGGCGGGAGGCGGCGGTGAGGGTGCG ATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGGGAGCTGCACCTGATCGGCGCGACGACGGTGGACGAGTA CCGCAGGCACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCGCACCCATCCTGGTCGGCGAGCCCGGCGTGGACGACA CCATCGAGATCCTGCGCGGCCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCATCACCGACGAGGCGGTGGTGGCC GCGGCCGAGCTGTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCGATCGACCTGATGGACCAGGCCGCCGC CCGGGTCCGGCTGCGGGCCGGGACCCCGCTGGAGGACACCCGGGAGATCGAGGACCGCGTCGCCGCCCTGAACCGGGAGA AGGACCAGGCCGTCGCCGACGAGGAGTACGAGCGCGCCAAGGAGCTCAGGGACCGGATCAAGGAGGCGGAGGCCGAACTG GCCGCGGCGGGCCGGACCGACGAGCACGCCCCGAAGGTCACCGCCGAGGACATCGCCCAGGTCGTCTCCCGCACCACCGG CATCCCGGTCGCCCAGCTCACCGAGGAGGAGCGGGAACGGCTGATGAAGCTGGAGGAACACCTGCACGGGCGGGTGGTCG GCCAGGACGAGGCGATCACCGCCGTCGCCCGGGCCGTGCGCCGTGCCCGGGCCGGCATGAGCGACCCCAACCGTCCCGTC GGCAGCTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAACTGGCCCGCGCGCTCGCCGCCGCCCTCTTCGGCGA CGAGAGCCGCATGATCCGCCTGGACATGAGCGAGTTCCAGGAGCGGCACACCGTCTCCCGGCTGGTCGGCGCCCCGCCCG GATACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGCCGTGCGCAGGCAGCCGTACGCCGTCCTGCTGCTGGACGAG GTGGAGAAGGCCCACCCCGACGTCTTCAACACCCTGCTGCAGCTCCTGGACGACGGCCGCCTCACCGACTCCCAGGGCCG CACCGTCGACTTCAAGAACACCGTCGTCATCATGACGTCGAACATCGGCGCCGACCGCATCCTGGCCGCGGGCACGGAGG ACTACGGCAAGATCCGCGAGGCGGTCATGCCGGTCCTCCAGCAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGAG ATCATCGTCTTCCGCGGCCTGGACCGCACCGAACTGCGCCAGGTCGTGGACCTGATGCTGGAGCACACCCGGCGCCGCCT GCACGCCCAGGACGTCTCCCTGGAGGTCACCGACGCGGCCGCCGACCTGCTCGCGAACCTCGGCCACCAGCCCGACTTCG GCGCACGCCCGCTGCGCCGCACCATCCAGCGCGAGGTGGACGACCGCCTCGCCGACCTGCTCCTCTCCGGCCGGCTCGGC GCGGGCGACCGGGCGGTGGTGGACGCGCCGGACGGCTCGGTGGAGATCCGGACGGACAAGCCGGCCGCCGTGGAGGGCTG A Protein sequence : MSTPGFGFGRSPFEEFDELMSRFFGPGGQTAPAARRPQRVDIGSLLSERAMELVAEARDIAGAEGSEELDARHLLAAATR NESTRRLLTESGTDPDRLREQLGTTGNGGERTEPTTLTPSAKRALLDAYRVSRAEDASYIGPGHLLRALAANPESAAGQA LGDGGWEPTRLPTEGQAERKKPSSTPTVDEYGRDLTQDARDGRLDPVIGRDDEVEQTIEVLSRRSKNNPVLIGDPGVGKT AVVEGIAQRIVAGDVPRTLAGKRLVSLDLAGMVAGTKYRGEFEERLKKLLDEVGEHGDELILFLDELHTVVGAGGGGEGA MDAGNMLKPALARGELHLIGATTVDEYRRHIEKDAALERRFAPILVGEPGVDDTIEILRGLRDRYEAHHQVRITDEAVVA AAELSDRYITSRFLPDKAIDLMDQAAARVRLRAGTPLEDTREIEDRVAALNREKDQAVADEEYERAKELRDRIKEAEAEL AAAGRTDEHAPKVTAEDIAQVVSRTTGIPVAQLTEEERERLMKLEEHLHGRVVGQDEAITAVARAVRRARAGMSDPNRPV GSFLFLGPTGVGKTELARALAAALFGDESRMIRLDMSEFQERHTVSRLVGAPPGYVGHEEAGQLTEAVRRQPYAVLLLDE VEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFKNTVVIMTSNIGADRILAAGTEDYGKIREAVMPVLQQHFRPEFLNRIDE IIVFRGLDRTELRQVVDLMLEHTRRRLHAQDVSLEVTDAAADLLANLGHQPDFGARPLRRTIQREVDDRLADLLLSGRLG AGDRAVVDAPDGSVEIRTDKPAAVEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-162 | 55 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B446_31975 | YP_008390010.1 | DNA binding ATP-dependent peptidase | VFG0080 | Protein | 3e-148 | 51 |
| B446_31975 | YP_008390010.1 | DNA binding ATP-dependent peptidase | VFG0079 | Protein | 4e-171 | 49 |
| B446_31975 | YP_008390010.1 | DNA binding ATP-dependent peptidase | VFG2084 | Protein | 1e-89 | 41 |
