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Name : lysS (B446_31890) Accession : YP_008389993.1 Strain : Streptomyces collinus Tu 365 Genome accession: NC_021985 Putative virulence/resistance : Unknown Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 7381387 - 7384665 bp Length : 3279 bp Strand : + Note : COG2898 Uncharacterized conserved protein DNA sequence : ATGACTGCCACCGCCGGGCCGGACGCACGCGGGTCGGCCGCGGGCCGGACACTCCCGCCCGCCGGCGGCCGCCTCGGCTG GGTGCCCGAGGCCTTCGGGACCCTGTTCGCCTTCCTCGGCCTGCTCTGCGCGCTGCTCGCGTTCATCGCCCCCCTGCGCA CCGTGCTCCGCCCGGTCGTGCGCGCCCTCGACCTGCTCCTGGTGCCGATCAGCGCCAACCTGGCGTACGCGGTCTTCCTG TTCCTGCTGGCCGGCGCCACCGCCGCCCGCAAGAAGGTCGCCTGGTGGCTGGTCGTGGTCTACCTGGGCCTGCTGGTCGT CTTCGACGTCCTCGGCCTGGCCCTGGGCCAGTACGCCGTCTCGCTGCCCTCCTTCGTGCTCTGCGGCCTGCTGCTGCTCC TGCTGGTGCTCGCCCGCGCGGAGTTCTACGCGGCCTCCCGCCGCGGTGCCGTGTGGCGCGCCCTGGGGGTGCTGGTGGCC GGGCTCGTCGTCGCCATCGTCGTCGGCTGGGGGCTGGTCTCGCTGTTCCCGGGCACCCTGCCGGAGGGCCAGCACCTGGC GTGGGCGGCGGACCGGGTGTGCGGCGGGCTGGTCTCCAACAGCTCCTTCGACGGCCGGCCGCCGCGCAAGGTCACCTTCC TGCTCGGCCTGTTCGGCGCGCTCGCGCTGCTGAACGCGGCCGCCGCGCTCTTCCGCTCCCAGCGCCTGGAAGCGGCCCTG CACGGCGACGAGGAGGCACGTATCCGCGCCCTCCTCGGGGCCTACGGCGCACAGGACTCGCTCGGCTACTTCGCCACCCG GCGGGACAAGGCCGTCGTCTTCTCCTCCAGCGGCAAGGCCGCCGTCACCTACCGCGTCGAGGCCGGCGTGTGCCTGGCCA GCGGCGACCCCGTGGGCGACCCCGAGGCGTGGCCGCACGCGATCGCCGCGTGGCTGGACGTGGCCCGCCGGCACGCCTGG GCGCCCGCGGTGATGGGCGCCTCGGAGTCCGGGGCCCGCGCCTTCGCCCGCGCCGGGCTCGGCGCCCTCCAGCTCGGCGA CGAGGCGATCGTGCACGTGTCCGGGTTCGACCTGAACGGCCGGGACATGCGTGTCACCCGGCAGGCCGTGCACCGCGTCC GCCGCACCGGGGCCACCTCGCGCATCCGCCGCCACGCCACCCTCACCGACCGCGAGATGGAGGAGATCGTCGACAAGGCC GACGCCTGGCGCGACACCGAGACCGAGCGCGGCTTCTCCATGGCCCTGGACCGGCTCGGCGACCCCAGCGACGGCGACTG CCTCCTCGTGGAGGCCCTGAGCGAGGACGGCAGGCTGCTCGCCCTGCTCTCCTTCGTGCCCTGGGGCCGCGGCGGCGTCT CCCTGGACCTGATGCGCCGTGACCGCAGCGCCCCCAACGGGGTGATGGAGTTCATGGTCGCCGAACTGTGCGCGGCCGCC CCGAAGCTGGGGGTGCGCAGGATCTCGCTGAACTTCGCCGTCTTCCGGTCGGTGTTCGAGGAGGGCGCCCGCATCGGCGC GGGCCCGGTGCTGAGGCTGTGGCGCCGGCTGCTGCTGTTCTTCTCCCGCTGGTGGCAGCTGGAGGCCCTCTACCGCTCCA ACGCCAAGTACCGCCCGGAGTGGTACCCGCGCTTCATCTGCTACGGCGAGACCGCCTCCCTCGCCCGCATCGGCCTCGCC TCCGCCATCGCCGAGGGGTTCGTCTCCGTGCCTTCGCTGCGCAAACTCTGGGGAAAGGGGCACCCGAAGACAGGGCAGCG GCCCGCCACCACCGAGGGCCTGCCGCCCCTGGCGGCGCTCGGCCTCGACGGAGGGGACGAGGCCGGGACCGCCGTCCCGG ACGCGGGCCTGTCCGACCAGGTCCGCGTCCGGCTCCGCAAGCTCGACCGGCTGCGCGCCACCGGCACCGACCCGTACCCG GTCGGCGGTCCCACCCCGACCCACGCCCTCGCCGACGTCCCGCACGGCGGGGACGTCACCGTGGCAGGCCGGGTCATGCT GGTCCGCGACTTCGGCGGCATCGTCTTCGCCGTGCTGCGGGACTGGTCCGGGGACCGTCAACTCGCCCTCATCCGCGACC GGTCCGGCGCCGCCCTCGACCGTTTCCGGGACACGGCCGACATCGGCGACCACATCACCGCCACCGGCCGCGCGGGGGTG AGCGACAAGGGCGAGCCCACCGTCTTCGTCACCTCGTGGCACCTGGCCGGCAAGTGCCTGCACCCGCTGCCCGACAAGCG CCGCGGCCTCGCCGACCCCGAGGCCCGGGTCCGCCGCCGCTACCTCGACCTGGTCACCAGCCCCGCCGCCCGCCAGGTGG TCCGCACCCGCTCCACCGTCGTCCAGGCCCTGCGCCAGGGCCTGCTGGACCGCGGCTACGTCGAGGTCGAGACGCCGATG CTGCAGCAGATCCACGGCGGCGCCAACGCACGCCCCTTCACCACCCACATCAACGCCTACGACCTCGACCTCTACCTGCG CATCGCGCCCGAGCTGTACCTCAAACGGCTGTGCGTGGGCGGCCTGGAGCGGGTCTTCGAGATGGGCCGCACCTTCCGCA ACGAGGGCGTCTCCTACAAGCACAACCCCGAGTTCACGATGCTGGAGGCCTACCAGGCGCACGCCGACTACGACGTGATG CGCGACCTGGCCCGTGAGCTGATCCAGGGCGCGGCGACCGCCGCCTTCGGCTCCGCGGTCGCCCGCAAGGACGGCCGGGA GTACGACATCTCGGGGGACTGGCCCGTGAAGACGGTCCACGGGGCGCTCTCCGAGGCCCTGGGCGAGGAGATCGGCCCCG GCACCGAACTGCTCAGGCTGCACCGGCTGTGCGACCGCACGGGCGTGCCGTACACCCCCGACGACACCCCGGGCGACGTG GTCCTGGAGATGTACGAGCGGCTGGTCGAGGAGCGCACCCGGCTGCCCACGTTCTACAAGGACTTCCCCACCGAGGTCTC CCCGCTCACCCGGCAGCACCGCGCCGACCCGCGCCTCGCCGAGCGCTGGGACCTCGTCGCCTTCGGCACCGAACTCGGCA CCGCCTACTCCGAACTGACCGACCCCGTCGAACAGCGCCGCCGGCTCACCGAGCAGTCCCTGCTGGCCGCGGGCGGCGAC CCCGAGGCCATGGAGCTCGACGAGGACTTCCTCGACGCCCTGGAGTACGCGATGCCGCCGACCGGCGGCCTCGGCATCGG CGTCGACCGGCTGGTCATGTTCCTCACCGGCCTCACCATCCGCGAGACCCTGCCCTTCCCGCTGGTGCGCCGCCGCTAG Protein sequence : MTATAGPDARGSAAGRTLPPAGGRLGWVPEAFGTLFAFLGLLCALLAFIAPLRTVLRPVVRALDLLLVPISANLAYAVFL FLLAGATAARKKVAWWLVVVYLGLLVVFDVLGLALGQYAVSLPSFVLCGLLLLLLVLARAEFYAASRRGAVWRALGVLVA GLVVAIVVGWGLVSLFPGTLPEGQHLAWAADRVCGGLVSNSSFDGRPPRKVTFLLGLFGALALLNAAAALFRSQRLEAAL HGDEEARIRALLGAYGAQDSLGYFATRRDKAVVFSSSGKAAVTYRVEAGVCLASGDPVGDPEAWPHAIAAWLDVARRHAW APAVMGASESGARAFARAGLGALQLGDEAIVHVSGFDLNGRDMRVTRQAVHRVRRTGATSRIRRHATLTDREMEEIVDKA DAWRDTETERGFSMALDRLGDPSDGDCLLVEALSEDGRLLALLSFVPWGRGGVSLDLMRRDRSAPNGVMEFMVAELCAAA PKLGVRRISLNFAVFRSVFEEGARIGAGPVLRLWRRLLLFFSRWWQLEALYRSNAKYRPEWYPRFICYGETASLARIGLA SAIAEGFVSVPSLRKLWGKGHPKTGQRPATTEGLPPLAALGLDGGDEAGTAVPDAGLSDQVRVRLRKLDRLRATGTDPYP VGGPTPTHALADVPHGGDVTVAGRVMLVRDFGGIVFAVLRDWSGDRQLALIRDRSGAALDRFRDTADIGDHITATGRAGV SDKGEPTVFVTSWHLAGKCLHPLPDKRRGLADPEARVRRRYLDLVTSPAARQVVRTRSTVVQALRQGLLDRGYVEVETPM LQQIHGGANARPFTTHINAYDLDLYLRIAPELYLKRLCVGGLERVFEMGRTFRNEGVSYKHNPEFTMLEAYQAHADYDVM RDLARELIQGAATAAFGSAVARKDGREYDISGDWPVKTVHGALSEALGEEIGPGTELLRLHRLCDRTGVPYTPDDTPGDV VLEMYERLVEERTRLPTFYKDFPTEVSPLTRQHRADPRLAERWDLVAFGTELGTAYSELTDPVEQRRRLTEQSLLAAGGD PEAMELDEDFLDALEYAMPPTGGLGIGVDRLVMFLTGLTIRETLPFPLVRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 6e-154 | 46 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-153 | 46 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 6e-154 | 46 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 6e-154 | 46 |
