Gene Information

Name : B446_31655 (B446_31655)
Accession : YP_008389946.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7322747 - 7325386 bp
Length : 2640 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGACATGAACCGTCTCACCCAGAAGTCCCAGGAAGCCCTCCAGGAGGCCCAGAGCGCGGCCGTCGGCATGGGGCACAC
CGAGGTCGACGGGGAGCACCTGCTGCTCGCGCTTCTCGACCAGGAGGACGGTCTGATCCCGCGGTTGCTGCAACAGGCCG
GCAGCGAGCCGAAGGAGCTGCGCGCGGCCGTGCGCGAGGAACTCTCCCGCCGCCCGAAGGTCACCGGTCCGGGCGCGGCA
CCCGGCCAGGTCTTCGTCACCCAGCGCCTGTCCCGCCTGCTCGACGCCGCCGAGCGGGAGGCCAAACGCCTCAAGGACGA
GTACGTGTCCGTGGAGCACCTCCTGCTCGCCCTGGCCGAGGAGGGCTCGGCGACCGCCGCCGGACGCCTGCTCAAGGAGC
ACGGCGTGACCCGCGACTCGTTCCTGAGTGCGCTCACCCAGGTCCGCGGCAACCAGCGGGTCACCTCCGCCAACCCCGAA
GTGGCCTACGAGGCTCTGGAGAAGTACGGCCGCGACCTGGTCCTCGAGGCCCGGTCCGGGCGGCTGGACCCGGTCATCGG
CCGTGATGCGGAGATCCGCCGCGTCACCCAGATCCTCAGCCGCAAGACCAAGAACAACCCCGTCCTCATCGGCGATCCCG
GCGTCGGCAAGACCGCCATCGTCGAGGGCCTGGCCCAGCGCATCGTGCGCGGCGACGTCCCCGAGGGCCTGCGGGACAAG
ACGGTGTTCGCCCTCGACATGGGCTCCCTGGTCGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAACGCCTCAAGGCCGT
GCTGTCCGAGGTGAAGGCCGCCCAGGGGCGCATCCTGCTCTTCGTCGACGAACTGCACACCGTCGTCGGCGCGGGCGCCG
CCGAAGGGGCCATGGACGCGGGCAACATGCTCAAGCCGATGCTCGCCCGCGGCGAACTCCACATGATCGGCGCCACCACC
CTCGACGAGTTCCGCAAGCACATCGAGAAGGACGCCGCCCTCGAACGCCGCTTCCAGCAGGTGCTGGTCGACGAGCCGAG
CGTGGAGGACACCATCTCCATCCTGCGCGGACTGCGCGAACGCCTCGAGGTCTTCCACGGCGTGAAGATCCAGGACACCG
CGCTGGTCTCCGCGGCCACCCTCAGCCACCGCTACATCACCGACCGGTTCCTGCCCGACAAGGCCATCGACCTCGTCGAC
GAGGCGTGCGCCCGGCTGCGTACCGAGATCGACTCGATGCCCGCCGAACTCGACGAGATCACCCGTCGCGTCACCCGCCT
GGAGATCGAGGAGGCGGCCCTGTCCAAGGAGACCGACGCCGCCAGTAGGACCCGCCTGGAGGAACTGCGCAAGGAACTGG
CCGACCTGCGCGGCGAGGCCGACGCCAAACGCGCCCAGTGGGAGGCCGAACGGCAGGCCATCCGCCGCGTGCAGGAGCTG
CGCCAGGAACTGGAGCAGGTCCGCCTCGAGGCGGAGGAGGCCGAACGCGCCTACGACCTCAACCGCGCCGCCGAACTCCG
CTACGGCCGCCTCCAGGAACTGGAGCGCCGGCTGAAGGCCGAGGAGGAGCAACTGGCCGCCAAACAAGGGCAGAACCGGC
TGCTGCGCGAGGTCGTCACCGAGGAGGAGATCGCCGAGATCGTCGCCGCCTGGACCGGCATCCCCGTCGCCCGCCTCCAG
GAGGGCGAACGCGAGAAGCTGCTGCGCCTCGACGAGATCCTGCGCGAGCGCGTCATCGGCCAGGACGAGGCCGTCAAACT
CGTCGCCGACGCCATCATCCGCGCCCGCTCCGGCATCCGCGACCCGCGCCGCCCCATCGGCTCGTTCATCTTCCTCGGCC
CCACCGGCGTCGGGAAGACCGAGCTGGCCAAAACCCTCGCGGCGGCCCTGTTCGACTCCGAGGAGAACATGATCCGCCTC
GACATGAGTGAATACCAGGAGCGGCACACCGTCAGCCGGCTCATGGGCGCACCACCCGGATACATCGGCTACGAGGAAGG
CGGCCAGCTCACCGAGGCCGTGCGCCGCAAGCCGTACTCGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCACACCGATG
TCTTCAACACCCTGCTGCAGGTCCTCGACGACGGCCGCATCACCGACTCCCAGGGCCGCACCGTCGACTTCCGCAACACC
GTGATCATCATGACGTCGAACATCGGCTCCGAGCACCTCCTCGACGGCGCCACCGCCGAGGGCGAGATCAAGCCGGACGC
CCGCGCCCTGGTGATGGGCGAGCTGCGCGGGCACTTCCGCCCGGAGTTCCTCAACCGCGTCGACGACATCGTGCTGTTCA
AGCCGCTCGGCGAGCGGCAGATCGAGCGGATCGTGGAGCTGCAGTTCGACGAGCTGCGCCGCCGGCTCGCCGAACGCCGC
ATCACCGTCGAGCTCACCGAAGCCGCACGGGAGTTGATCGCCCACCAGGGCTACGACCCGGTCTACGGTGCCCGGCCGCT
GCGCCGCTACATCTCCCACGAGGTCGAGACGATGGTCGGGCGCGCCCTGCTGCGCGGTGACGTCCAGGACGGCGCGACGG
TCCGCGTCGACGCCGAACACGGAGAGCTGGTGGTCACCTACGACCAGCCCGAGGACGTGAGGGGAGCGCGAGCGGCATGA

Protein sequence :
MDMNRLTQKSQEALQEAQSAAVGMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGSEPKELRAAVREELSRRPKVTGPGAA
PGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLALAEEGSATAAGRLLKEHGVTRDSFLSALTQVRGNQRVTSANPE
VAYEALEKYGRDLVLEARSGRLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK
TVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT
LDEFRKHIEKDAALERRFQQVLVDEPSVEDTISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVD
EACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKETDAASRTRLEELRKELADLRGEADAKRAQWEAERQAIRRVQEL
RQELEQVRLEAEEAERAYDLNRAAELRYGRLQELERRLKAEEEQLAAKQGQNRLLREVVTEEEIAEIVAAWTGIPVARLQ
EGEREKLLRLDEILRERVIGQDEAVKLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEENMIRL
DMSEYQERHTVSRLMGAPPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVLDDGRITDSQGRTVDFRNT
VIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRRRLAERR
ITVELTEAARELIAHQGYDPVYGARPLRRYISHEVETMVGRALLRGDVQDGATVRVDAEHGELVVTYDQPEDVRGARAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-100 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B446_31655 YP_008389946.1 ATP-dependent Clp protease VFG2076 Protein 1e-115 43
B446_31655 YP_008389946.1 ATP-dependent Clp protease VFG2084 Protein 1e-94 41