Gene Information

Name : B446_23860 (B446_23860)
Accession : YP_008388394.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5478426 - 5479208 bp
Length : 783 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGAGGACCGAGAGGACCAACACCCAGCCGCGCGGCGGCACGGGAGCCCGGAACCAAGCCGCGCTGCGACTGGAGGAGGT
CACCAAGGTCTACGGCCGCGGCGGCCGCGGTGTCCGGGCCCTCGACGGGGTCACCGTGGACATCGCCCGCGGCTCCTTCA
CCGCCGTCATGGGGCCGTCCGGCTCCGGCAAGTCGACCTTCCTGCACTGCGCGGCCGGCCTGGACAAGCCGTCGTCCGGC
CGTGCCTACATCGGCGAGACCGAACTCGGCGGGATGAACGAGACCCAGCTGACCAAGCTGCGCCGCGAGCGCATCGGCTT
CGTCTTCCAGGCGTTCAACCTCGTACCCGCCCTGTCCGTCCGGCAGAACGTGGAGCTTCCGCTGCGCCTGTCCGGCTCCC
GCCTGGACGCGCAGTGGCTCGAGGAGATCCTGGTGCGCGTCGGCCTCGGTGGACGCGCGTCGCACCGCCCCGCCGAACTC
TCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCCCTGATCACCCGTCCCGACGTCATCTTCGGCGACGAGCCCAC
CGGCGCCCTCGACACCGTCACCGCCAAGGAGATCCTCTCCCTGCTGCGCAACTGCGTCGACGAGACCGGCCAGACCGTCG
TCATGGTCACCCACGACCCGGTCGCCGCGTCCTACGCCGACACCGTGCTGTTCCTGGCCGACGGACGCATCGCCGACCGC
ATGCACGCCCCGACCGCCGAGCGCGTCGCCGACCGGATGACACACCTGGGAGCGTGGGCCTGA

Protein sequence :
MRTERTNTQPRGGTGARNQAALRLEEVTKVYGRGGRGVRALDGVTVDIARGSFTAVMGPSGSGKSTFLHCAAGLDKPSSG
RAYIGETELGGMNETQLTKLRRERIGFVFQAFNLVPALSVRQNVELPLRLSGSRLDAQWLEEILVRVGLGGRASHRPAEL
SGGQQQRVAIARALITRPDVIFGDEPTGALDTVTAKEILSLLRNCVDETGQTVVMVTHDPVAASYADTVLFLADGRIADR
MHAPTAERVADRMTHLGAWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B446_23860 YP_008388394.1 ABC transporter CP001581.1.gene598.p Protein 9e-47 45
B446_23860 YP_008388394.1 ABC transporter CP001581.1.gene798.p Protein 1e-44 45
B446_23860 YP_008388394.1 ABC transporter NC_012469.1.7686878. Protein 3e-44 44
B446_23860 YP_008388394.1 ABC transporter NC_008702.1.4606598. Protein 1e-36 42