Gene Information

Name : smpB (B446_15440)
Accession : YP_008386717.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3561788 - 3562267 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGGCTAAGGAAAAAGGGCGCAAGCTGATCGCGCAGAACAAGAAGGCGCGGCACGACTACCACATCCTCGACACGTACGA
GGCGGGCCTCGTGCTGATGGGGACCGAGGTGAAGTCGCTGCGCCAGGGGCGGGCCTCGCTGGCCGACGGCTTCGTGCAGC
TCGACGGCCACGAGGCGTGGCTGCACAACGTGCACGTGCCCGAGTACAGCCAGGGCACCTGGACCAACCACAGCGCCCGC
CGCAAGCGGAAGCTGCTGCTGCACCGCGACGAGATCGACAAGCTGGAGTCGAAGTCCCAGGAGACGGGCCACACCATCGT
GCCCCTCGCCCTGTACTTCAAGGACGGCCGCGCCAAGGTCGAGATCGCGCTGGCGAAGGGCAAGAAGGAGTACGACAAGC
GCCAGACCCTGCGCGAGAAGCAGGACCGCCGCGAGGCGGACCGCGCCATGTCGGCGGTGCGCCGCAAGCAGCGGGCCTAG

Protein sequence :
MAKEKGRKLIAQNKKARHDYHILDTYEAGLVLMGTEVKSLRQGRASLADGFVQLDGHEAWLHNVHVPEYSQGTWTNHSAR
RKRKLLLHRDEIDKLESKSQETGHTIVPLALYFKDGRAKVEIALAKGKKEYDKRQTLREKQDRREADRAMSAVRRKQRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-41 56
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-34 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 5e-21 43