Gene Information

Name : B446_13900 (B446_13900)
Accession : YP_008386409.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3209030 - 3209788 bp
Length : 759 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGCCAAGCGACTGGGCCGTAGAACTGCACGGAGTCACGCGCCGCTACGGACGCTCGGCCACCGCCGTGCACGCCCTGCG
CGGCATCGACCTCGCCCTGCCCTCGGGCACCTTCACCGCCGTGATGGGCCCCTCCGGCTCCGGCAAGTCCACCTTCCTGC
AGTGCGCGGCGGGCCTCGACCGCCCCACCGCCGGCCGGGTGCTGCTCGGCGGCACGGACATCACCGGCCTCAGTGAGAAC
AAGCTGACCGCGCTGCGCCGCACCCGCCTCGGCTTCGTCTTCCAGGCGTTCAACCTGCTGCCCTCACTCACCGTGGAGCA
GAACGTCGTCCTGCCGACGCGGCTGGCCGGCCACCGCCCCGACCGGCGCCGCTGCGCCGAGGTGCTCGCCCAGGTCGGCC
TCGCCGACCACGCCCGCCGCCGCCCCGCCCAGCTCTCCGGCGGCCAGCAGCAGCGGGTGGCCGTCGCCCGGGCCCTGGTC
GCCCGCCCCGACGTCGTCTTCGCCGACGAACCCACCGGCGCCCTGGACACCACCACGGCGGCGGAGATCCTCGCCCTGCT
GCGCGGTGCCGTCGACACCCAGCGCGCCACGGTCGTCATGGTCACCCACGACCCGTCCGCCGCCGCCTGGGCCGACCGCG
TCCTGTTCCTCGCCGACGGCACCCTCGTCGACCACCTGGACGGCGCCCCGGCCGACCGCATCGCCGCCCGCATGACGACC
CTCACCAGCCACCTGGCCCACCGCCGCACCGCGGCCTAG

Protein sequence :
MPSDWAVELHGVTRRYGRSATAVHALRGIDLALPSGTFTAVMGPSGSGKSTFLQCAAGLDRPTAGRVLLGGTDITGLSEN
KLTALRRTRLGFVFQAFNLLPSLTVEQNVVLPTRLAGHRPDRRRCAEVLAQVGLADHARRRPAQLSGGQQQRVAVARALV
ARPDVVFADEPTGALDTTTAAEILALLRGAVDTQRATVVMVTHDPSAAAWADRVLFLADGTLVDHLDGAPADRIAARMTT
LTSHLAHRRTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-40 52
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 52
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-41 52
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 52
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B446_13900 YP_008386409.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-37 47
B446_13900 YP_008386409.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-42 46
B446_13900 YP_008386409.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-37 44